Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0813 ATGGAAGAACAAAAAAGCATGAAAGACAACAAAACAACAAAAAACGAGTTTGTTCTTAGAATTTCCAATAATGAACAAAACAGAGATTTTGGACCTACCCAAGTTGTTGAAACAAGTTCAAATTCTCCTCAGTTCATTTCCAAGATGGGTTCATCTTCATCTCCAAAAGGGTCACATGCAGAACTCATAGAGCTTGAAAATCTTAGAACAACAAGCACTTTTTTTGGTCGGTCAGAATTTTCAAAGCCAAAGTCAAGAATGGTGGAACCAACATTTCAAAAAGATGCAAAATTTGTTGAAGAAAAGACTCCAAGGGAAGTTCATGATGGAAGTGGAAGTGGAAATGTTGTTACACCAAAAAACCCTTTGATTGTTACTCCAAGAGAGGTTGAAGAAGAAGATGATGATGAAGAAGAAGTGTACAAGATTGCAGAAATTGAAGTGAGTAAGAGATCTAGTAAAAAGAAGAAATTTTCTAGTTGGATTGAGTTTTTAGCATTTGTTTTAATTTTAGGGTTTTTGATTGCAAGTTTAAGGGTTCATAAATTGGAAAATAAAGAAATTTGGAGTTTAGAACTTTGGAAATGGTGTGTGCTTACATTGGTAATTATCTCTGGTAGATTAGTCACTAGTTGGTTTATCAATGTTTTGGTTTTCTTAATTGAAAGAAACTTTTTGTTTAAGAAGAAAGTTTTGTACTTTGTTTATGGTGTTAGGAAGAGTGTTCAAGCTTTTGTATGGTTTAGTTTGGTTCTTTTGGTATGGAGTTTAATTTTCCATCAAGGTGTTAAGAGAACAAGAAAAGTTACTAGGATTCTTGAATACATCACAAGGGCACTTGCATCTTGTGTTATTTCGGCTGCTATATGGTTAGCGAAAACATTGTTGATTAAGCTATTGTCTTCATATTTTCAGTCAACTAGATTTTTCGATAGGGTTCAAGAATCGATTTTTCATCAGTACATACTTAGGACTCTTTCTGGTCCACCTTTGATGGAGATGGTTGAAACAGTAGGCAAGAGTTCGAGTAACGGCCGACTAAGTTTCAAGACTAATAAAAAGAAAGGGAAGAAGGAACAAGAACAAGTTATTGATGTAGACAAGCTTAAGAAAATGAAACAAGGGAAAGTTTCGGCTTGGACTATGAAAGGATTGATTAATGTTATAAGGAGTTCTGGTTTGTCGACGATCAGCTATACACCAGAGAGCATCTATGAAGAAGTTAGTGACAACAATGATAATGAAATTAGAAGTGAGTGGGAAGCGAAGGCGGCTGCATATCGAATTTTCAGGAATGTTGCTAAGCCAGGAAGCAAGTACATTGATAAGGAAGACCTCTTGCGCTTCATGAAAATTGAAGAAGTGGAAAATTTGCTTCCGTTATTTGAAGGAGCGGAAGAGACTAGAAGAATTAAGAGGAAGTCTTTGAAGAACTGGCTGGTGAAAGTCTACCTAGAACGCCGATCACTTGTGCATTCACTAAATGATACCAAAACGGCTGTTGATGAACTGAATAACCTTGCTTCTGCAATTGTTCTTGTTGTCGCCATTATTGTTTGGTTTCTTGTGATGGGATTCTTAACAACCCAAGTTCTTGTCTTTATTTCATCACAACTTTTACTTGTGGTGTTTGTTTTTGGCAACACAGCTAAGACAACATTTGAAGCTATTATATTTGTTTTTGTGATGCATCCGTTTGACGTTGGTGATCGATGTGTCATTGATGGTGTTCAGATGATTGTAGAAGAGATGAACATATTGACTACAATCTTTTTGAGATATGACAATGAAAAGATATTCTATCCAAATTCAGTTCTTGCAACCAAGCCAATCAGTAACTTCTATCGGAGTCCAGAAATGTGTGATTCAGTTGAATTTGCTGTTGATGTTTCAACTTCAATAGAAAGTATTGGAGCCTTAAAGGCTAGATTAAAAGTATACTTGGAAAGTAGGCCTCAACATTGGCGTCCAAACCACAATGTAGTGGTTAAGGATATTGAGAATATAAACAAGATGAAAATAGGTTTATATGTTACTCACACCATAAACTTTCAGAATTATACGGATAAGAACATCAGAAGATCTGAATTAATGCTGGAGTTAAAGAAAATCCTTGAAGATCTTGATATTAAATACCATCTGCTGCCACAAGAAGTACTTCTTAATCATGTAAGTTCACAAGACCATAAGGCACAAAAAGCATAA 2205 0.3528 MEEQKSMKDNKTTKNEFVLRISNNEQNRDFGPTQVVETSSNSPQFISKMGSSSSPKGSHAELIELENLRTTSTFFGRSEFSKPKSRMVEPTFQKDAKFVEEKTPREVHDGSGSGNVVTPKNPLIVTPREVEEEDDDEEEVYKIAEIEVSKRSSKKKKFSSWIEFLAFVLILGFLIASLRVHKLENKEIWSLELWKWCVLTLVIISGRLVTSWFINVLVFLIERNFLFKKKVLYFVYGVRKSVQAFVWFSLVLLVWSLIFHQGVKRTRKVTRILEYITRALASCVISAAIWLAKTLLIKLLSSYFQSTRFFDRVQESIFHQYILRTLSGPPLMEMVETVGKSSSNGRLSFKTNKKKGKKEQEQVIDVDKLKKMKQGKVSAWTMKGLINVIRSSGLSTISYTPESIYEEVSDNNDNEIRSEWEAKAAAYRIFRNVAKPGSKYIDKEDLLRFMKIEEVENLLPLFEGAEETRRIKRKSLKNWLVKVYLERRSLVHSLNDTKTAVDELNNLASAIVLVVAIIVWFLVMGFLTTQVLVFISSQLLLVVFVFGNTAKTTFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDNEKIFYPNSVLATKPISNFYRSPEMCDSVEFAVDVSTSIESIGALKARLKVYLESRPQHWRPNHNVVVKDIENINKMKIGLYVTHTINFQNYTDKNIRRSELMLELKKILEDLDIKYHLLPQEVLLNHVSSQDHKAQKA* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0813 734 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 725 IPR016688 -
Tpr5g0813 734 Gene3D - 565 614 IPR023408 -
Tpr5g0813 734 PIRSF Memb_At2g17000 1 734 IPR016688 -
Tpr5g0813 734 Pfam Mechanosensitive ion channel 506 711 IPR006685 GO:0016020|GO:0055085
Tpr5g0813 734 SUPERFAMILY Sm-like ribonucleoproteins 554 614 IPR010920 -
Tpr5g0813 734 MobiDBLite consensus disorder prediction 21 58 - -
Tpr5g0813 734 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 11 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0813 Tpr-Chr5 14554801 14559419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0813 38 721 Mechanosensitive Ion Channel Family AT5G12080 50.789 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0813 K22048 - gmx:100777332 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0813 5 14554801 14559419 Tpr5g0813 5 14554801 14559419 ECH