Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0812 ATGGTCAAACTATCCTCTTGTAACTCTTGGCTCTGTATTTTCTTTGTCTCACTCTATTACTTCTTCACTTGCTTAGCTAAAAATACTAGAAACATCACCACTGATGAATTTGCACTTCTTGCATTCAAATCCTCTATTACCTTAGACCCTCATCATATATTTAGTAATTGGTCAATCTCATCTCCATCTTTTTCCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGCACGTCATGGAAGAGTAAAAGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACAATTTCTCCTCAATTGGGAAATCTATCTTTCCTAGTTGTTCTTGATCTACGTAGCAATAACTTCCATGGTTACTTGCCACAAAAGTTACTTCAATTACATAGATTGAAATTGTTGGACTTGAGTTACAATGATTTTGTTGGAGAAATTCCTTTAAGGATAGGGGACTTGTCTAAACTTCAACATTTGAATTTTGGTTATAATAATATTGTTGGATTTATTCCTCAATCTATATCCAATTTGTCAATGCTAAAGTACTTAGATTGGAAATCAAATTTCATCAAAGGAACTATTCCACATGTTATTGGTCAACTTCATCGGTTGAAAATTTTGGATATTAGAAATAACAAGCTCTCTGGAATCATACCATCAACAATTTCGAACATGTCTTCACTTGAAGAAATCTATTTATCTAATAACTCCTTATCAGGAGAAATTCCAAAAGAAATTGGTGATCTCACACAATTGAGAATTATGAACCTCCAATATAATCTTCTCACGGGCAACATATTATTCATGTTCAACAACTCATTGTTGCAATACATGTATCTTGGTTTTAATAATCTATCTGGCATTCTTCCATCAAATGTTTGTCAAGGGATTCCAAACCTTAGATATCTCTATCTTTTTTCTAATGATCTTTCTGGTGAGATGCCAAAAGTTTGGCGTAATTGCAAAGAATTGGAAGATTTAGAGCTATCTTACAATAATTTTGACAAAGGAAGTATGCCGGCTGAAATTGGAAAATTGACCAAGCTTCAATATTTGTATCTTTCTAAAAACAACTTGGAGGGTGAAATTCCATTCTCCATCTTCAATAGCTCTTCTTTGATGGAGATCAATCTTGACATAAACAATTTAAATGGAAGTCTCCCACATGAGATGTGCCAATTTCCTCAACTTGAAATATTGACTCTACATGATAATCATTTTCGAGGAATAATTCCGCCATCGATTGGCAACTGCACATTGTTACAAAGGTTAACTTTAGTAGATAACTTCTTTACAGGTTCGATACCAATTGAGTTTGGCCATCTCAATCAACTTCAATTTCTACAACTGGGAAGAAACAACCTGAGTGGAGCTATTCCTTCAAAAATCTTCAACATTTCAACATTGAAAAGTTTGCTTCTCGAACAGAATTCTCTCTTCGGCAATCTTCCATTGCATGTGGGATTTGGCCTACCAAACCTACTACAATTACACATGTATGGAAACAATTTTTTTGGAAATATTCCAAGTAGTATATCCAATGCTTCAAATCTTGTTCAATTTGACTTGAGTGCTAATCAATTTAGCGGTATTATACCCGATTCTTTCGGAGATTTAAGAGTCCTCGAATCACTCATCATAGCTGGCAATAATTTAACATTAATAGATGATTCTCATGAATCCAACTTCTTTACTTCACTTACAAGTTGCAGATATCTGAGATATCTTGATGTGTCAGAGAACAATTTACTATCAAAACTTCCCAACTCCATTGGAAACTTATCTTTAGAAGATATTTGGGCACATTCTTGTGGAATTTATGGAAATATTCCACTAGAAATTGGAAACATGAGCAACTTGATTCGATTATCTATGTATAGGAATGATTTAAATGGAGTAATCCCAAGTACAATTAAAGGGTTAAATGAACTTCAGTCTTTGGATCTTGAATATAATGGAATGCAAGGATCTATAGTTCATGAGCTTTGTGAAATTAGGAGTTTGAGTGAGCTGTATTTAACAAGCAATAAGCTATTTGGAGTGTTACCAACATGTTTGGGAAATATGACTTCACTTAGAAAGTTTCACATAGGATCTAATAGGATAACTTCTAAGATACCTTCTTCCTTTTGGAATATCAAAGATATTTTAGAGGTAAACTTATCATCTAATGCTTTAATTGGAAACCTTCCACTTGAAATTAAGAATTTAAGAGCTCTTATACTATTAGATCTTTCAAAGAATCAAATTTCAAGCAACATTCCAACGGCGATAAGTTTCTTGACAACTTTAGAAACTCTCTCCTTAGCATATAACAAATTGAATGGTCCTATTCCAACATCACTTGGTGAAATGTTAAGTTTGAGTTTCTTGGACTTGTCTCAAAATCTTATAACTGGTGTGATTCCAAAATCATTAGAGTCACTTTCTTCTCTTAAGTACATAAATCTATCATACAATAGATTGCAAGGAGAGATTCCTGATGGAGGACCTTTCAAAAGCTTCACAGCTCAATCTTTTATGCATAATGACGCACTTTGTGGTCGTCCTCGCTTACAAGTACCTCCATGTGATAAACAAATTAGGAAAAAATCAAAGAAAAAGATGATATTAATCATTTGCATATTATCCATAATTGTTGTGTTAGGCATTTTGGTTGTTGCATGCATAATGCTTCGGAGGCGTAAAAGGAAAAAGGTTGAAAATCCACTTAAAAAAAGTGATTTGTCAGCTAATTTAGGGTTTCCAAGAAGAATATCCTACTATGAAATTGTGAAAGCAACTAACGGATTCAGTGAAAGTAATTTACTTGGAAAGGGCGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGGTGGCAATTAAAGTACTTGACTTGACATTGGAGGCAACATCAAGAAGTTTTGATGCAGAATGTAATGCAATGCGTAACCTTCGACATCGAAATCTTGTTCAGGTTATCAGTAGTTGTTCAAATGATGATTTCAAATCTTTGGTGTTGGAGTTTATGTCAAATGGAAGTGTGGAAAAATGGTTACACTCAGAGAACTATTGTTTGGATTTCTTACAAAGGTTGAATATAATGCTAGATGTGGCATTTGCATTGGAGTATCTACATCATGGTTCTTTCATACCAGTGGTTCATTGCGATTTGAAACCTAGTAATGTTTTACTAGATGAAGATATGGTTGCACATGTTAGTGATTTTGGCATTTCCAAGCTCTTGGATGAAGGACAATCAAAAACTCATACGCAGACATTAGCTACTCTTGGTTATGTTGCACCAGAATATGGATCTAAGGGAGTCATTTCAATTCAAGGAGATGTATACAGTTATGGGATAATGCTAATGGAAATGTTCACAAGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAAACTTGAAAACTTGGATTAGTGAATCAATGGTCAATTCAGTTATGGATGTTGTGGATTACAATTTAGTCTCACAACATGAGGAAGAACTTCATGAAATTTTAGCCTTAGCATTGAGCTGTTGTGAAGATTCACCAGAGGCAAGAATTAAAATGACAGATGTAACTGCATCGTTAATCAAAATCAAGACCTTAGTTATGCGATGA 3612 0.3419 MVKLSSCNSWLCIFFVSLYYFFTCLAKNTRNITTDEFALLAFKSSITLDPHHIFSNWSISSPSFSSSCNWVGVTCDARHGRVKALNLSNMGLEGTISPQLGNLSFLVVLDLRSNNFHGYLPQKLLQLHRLKLLDLSYNDFVGEIPLRIGDLSKLQHLNFGYNNIVGFIPQSISNLSMLKYLDWKSNFIKGTIPHVIGQLHRLKILDIRNNKLSGIIPSTISNMSSLEEIYLSNNSLSGEIPKEIGDLTQLRIMNLQYNLLTGNILFMFNNSLLQYMYLGFNNLSGILPSNVCQGIPNLRYLYLFSNDLSGEMPKVWRNCKELEDLELSYNNFDKGSMPAEIGKLTKLQYLYLSKNNLEGEIPFSIFNSSSLMEINLDINNLNGSLPHEMCQFPQLEILTLHDNHFRGIIPPSIGNCTLLQRLTLVDNFFTGSIPIEFGHLNQLQFLQLGRNNLSGAIPSKIFNISTLKSLLLEQNSLFGNLPLHVGFGLPNLLQLHMYGNNFFGNIPSSISNASNLVQFDLSANQFSGIIPDSFGDLRVLESLIIAGNNLTLIDDSHESNFFTSLTSCRYLRYLDVSENNLLSKLPNSIGNLSLEDIWAHSCGIYGNIPLEIGNMSNLIRLSMYRNDLNGVIPSTIKGLNELQSLDLEYNGMQGSIVHELCEIRSLSELYLTSNKLFGVLPTCLGNMTSLRKFHIGSNRITSKIPSSFWNIKDILEVNLSSNALIGNLPLEIKNLRALILLDLSKNQISSNIPTAISFLTTLETLSLAYNKLNGPIPTSLGEMLSLSFLDLSQNLITGVIPKSLESLSSLKYINLSYNRLQGEIPDGGPFKSFTAQSFMHNDALCGRPRLQVPPCDKQIRKKSKKKMILIICILSIIVVLGILVVACIMLRRRKRKKVENPLKKSDLSANLGFPRRISYYEIVKATNGFSESNLLGKGGFGSVYQGMLSSGKMVAIKVLDLTLEATSRSFDAECNAMRNLRHRNLVQVISSCSNDDFKSLVLEFMSNGSVEKWLHSENYCLDFLQRLNIMLDVAFALEYLHHGSFIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGQSKTHTQTLATLGYVAPEYGSKGVISIQGDVYSYGIMLMEMFTRKKPTNEMFSEELNLKTWISESMVNSVMDVVDYNLVSQHEEELHEILALALSCCEDSPEARIKMTDVTASLIKIKTLVMR* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0812 1203 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Tpr5g0812 1203 Gene3D Transferase(Phosphotransferase) domain 1 1005 1201 - -
Tpr5g0812 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 392 1199 - -
Tpr5g0812 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 151 - -
Tpr5g0812 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 208 333 - -
Tpr5g0812 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 150 241 - -
Tpr5g0812 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 334 390 - -
Tpr5g0812 1203 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515
Tpr5g0812 1203 Pfam Leucine rich repeat 782 820 IPR001611 GO:0005515
Tpr5g0812 1203 Pfam Leucine rich repeat 664 724 IPR001611 GO:0005515
Tpr5g0812 1203 SMART serkin_6 929 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 294 369 IPR032675 -
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 557 864 IPR032675 -
Tpr5g0812 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 150 241 - -
Tpr5g0812 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 392 1199 - -
Tpr5g0812 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 17 151 - -
Tpr5g0812 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 334 390 - -
Tpr5g0812 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 208 333 - -
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 187 293 IPR032675 -
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 372 485 IPR032675 -
Tpr5g0812 1203 SUPERFAMILY L domain-like 54 384 - -
Tpr5g0812 1203 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515
Tpr5g0812 1203 Pfam Leucine Rich Repeat 571 592 IPR001611 GO:0005515
Tpr5g0812 1203 SUPERFAMILY L domain-like 337 482 - -
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Tpr5g0812 1203 SUPERFAMILY Protein kinase-like (PK-like) 904 1194 IPR011009 -
Tpr5g0812 1203 SMART LRR_sd22_2 344 359 - -
Tpr5g0812 1203 SMART LRR_sd22_2 440 466 - -
Tpr5g0812 1203 SMART LRR_sd22_2 151 177 - -
Tpr5g0812 1203 SMART LRR_sd22_2 735 754 - -
Tpr5g0812 1203 SMART LRR_sd22_2 759 774 - -
Tpr5g0812 1203 SMART LRR_sd22_2 783 809 - -
Tpr5g0812 1203 SMART LRR_sd22_2 199 225 - -
Tpr5g0812 1203 Gene3D Ribonuclease Inhibitor 486 556 IPR032675 -
Tpr5g0812 1203 ProSiteProfiles Protein kinase domain profile. 929 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0812 1203 SUPERFAMILY RNI-like 488 825 - -
Tpr5g0812 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1048 1060 IPR008271 GO:0004672|GO:0006468
Tpr5g0812 1203 Pfam Protein kinase domain 930 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0812 1203 SMART LRR_typ_2 103 127 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 199 222 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 392 416 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 151 175 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 514 536 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 783 806 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 295 318 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 344 368 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 687 710 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 537 560 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 615 638 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 735 759 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 440 464 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 663 686 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 223 247 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 807 831 IPR003591 -
Tpr5g0812 1203 SMART LRR_typ_2 489 513 IPR003591 -
Tpr5g0812 1203 Gene3D Phosphorylase Kinase; domain 1 912 1004 - -
Tpr5g0812 1203 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0812 Tpr-Chr5 14546058 14551618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0812 664 825 Receptor kinase-like Gene Family AT3G47570 29.012 3.71e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr5g0812 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0812 - K13420 gmx:100784397 1245.72