Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0809 ATGCTTACATGCATAGCACGTCCGAAGAAACTCGGCGATGACTCAGTGAGTAACGAAAACGATTCAGAATCAAACAACAATGCAAAAACCGTTAAATCGCTGACGTGTCAAATTAAAGACATGGCGTTAAAAGCTTCAGGTGTTTACAAAAACTGTAATCCATGTGTTCAAGCGAGTCGACTCAGGAACGGTGGTTCTGAATCGGAAACTGACTCGGAGAAGTTTAGGAGGACGAGAACGTGGGGGAAGGAAATGGAAGCGAGGTTGAAAGGGATCTCGAGTGGAGAAGGAACGCCGAGTTCGTCTTCGTCGTCGTTTGGCGGTGGTAGTGGGAGGAGAGTGGTGGTTTTGGAGGAGGAGGAAGGGAAAGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACTTTTGTGTCGCTTTTACGTGGCGGGAATGATCTCAAGCGTATACGGTTCAGTCGCGATATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGATAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCGCTTCCAACACCAGCAAGATCTGAAGACGAGAGTTCAAAGCGTGAATCTATAGCAGACAGCCCAGTGACACCACCACTGACGAAAGAACAACTATCACGCAATTTATACCGACCAACAGGCATGGCAATGGGATACTCATCTTCAGATTCCTTTGATCAACACTCAATGCAGTCAAAACATTATCAGTATGACTTAAATGGTATGAACTCAACCCCAAAGGTTTCAACCATTAGTGCTGCAAAGACAGATATATCATCAATGGCTGCTTCTATAAGAAGTAGCTCTTCTAGAGAAGCTGATCGCTCTGGTGATTTATCGATGAGCAATGCTAGTGATCCGGATAGCGAATGGGTTGAGGAGGATGAACCTGGGGTGTACATTACTATCAGATCTTTGCCAGGTGGTAAAAGGGAGATCAGAAGAGTCAGGTTCAGTCGTGAAAAATTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAATCGCGCCAGAGTACATGAGCAATACTTGTGA 1077 0.4578 MLTCIARPKKLGDDSVSNENDSESNNNAKTVKSLTCQIKDMALKASGVYKNCNPCVQASRLRNGGSESETDSEKFRRTRTWGKEMEARLKGISSGEGTPSSSSSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLLRGGNDLKRIRFSRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESIADSPVTPPLTKEQLSRNLYRPTGMAMGYSSSDSFDQHSMQSKHYQYDLNGMNSTPKVSTISAAKTDISSMAASIRSSSSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSLPGGKREIRRVRFSREKFGEMHARLWWEENRARVHEQYL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0809 358 Pfam Transcription factor regulating root and shoot growth via Pin3 303 357 IPR013591 -
Tpr5g0809 358 Pfam Transcription factor regulating root and shoot growth via Pin3 123 177 IPR013591 -
Tpr5g0809 358 ProSiteProfiles BRX domain profile. 123 178 IPR013591 -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 94 109 - -
Tpr5g0809 358 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 358 IPR044532 -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 275 301 - -
Tpr5g0809 358 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 275 307 - -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 90 110 - -
Tpr5g0809 358 ProSiteProfiles BRX domain profile. 303 358 IPR013591 -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 188 221 - -
Tpr5g0809 358 MobiDBLite consensus disorder prediction 1 29 - -
Tpr5g0809 358 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0809 Tpr-Chr5 14366824 14376995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0809 1 358 Major Intrinsic Protein MIP AT1G31880 43.194 6.75e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0809 - - mnt:21409969 485.723