Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0801 ATGTCGTCTTCAGAGTCAGGTGGAAGAGTGAGTAGCTGTCAAGTTGAAGTGGAAAATCAAGGCCCGTTACCACCGCCTTCTGTTCCTATGACAAATATGCAAACGGATGGAATTAAGCCGCTTTCAGGAAAGCCATACTTTGATGTGATTATTTCAAAAACACATCTCGGACCCCGTTATGCAGTGGGGCCATCTGGCAATATATGCTCAACACTTCCTTTTGTAGCAGTTCCGACTATTATTAACTGTCGTGGTAAGGGCTGGAACATGATTTATAATGGCCAAAACATATGCAAGCAGTTTGATCGCAAGGGCTGGGGAAATTTTGTGAAGGGTAATAATTTGAAGCTTGGAGACGCATGCGTTTTCGAGCTCATGGAGCAAAGTAAAGATAAAATTGTCTTTGAAGTTCAAATTCTTAGAGGTGACTTCCAGTTTGAATTTTCTGGAATTGGTGAGAGTGAAGAAATGCCAGTTGTCCTATCTGAATTCCCTGGAACTGGTGAGAGGGATGCACCCTTTCTCATTGACTAG 534 0.427 MSSSESGGRVSSCQVEVENQGPLPPPSVPMTNMQTDGIKPLSGKPYFDVIISKTHLGPRYAVGPSGNICSTLPFVAVPTIINCRGKGWNMIYNGQNICKQFDRKGWGNFVKGNNLKLGDACVFELMEQSKDKIVFEVQILRGDFQFEFSGIGESEEMPVVLSEFPGTGERDAPFLID* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0801 177 CDD B3_DNA 79 141 IPR003340 GO:0003677
Tpr5g0801 177 ProSiteProfiles B3 DNA-binding domain profile. 79 143 IPR003340 GO:0003677
Tpr5g0801 177 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g0801 177 SUPERFAMILY DNA-binding pseudobarrel domain 45 141 IPR015300 -
Tpr5g0801 177 Gene3D - 33 143 IPR015300 -
Tpr5g0801 177 MobiDBLite consensus disorder prediction 1 18 - -
Tpr5g0801 177 Pfam B3 DNA binding domain 84 136 IPR003340 GO:0003677
Tpr5g0801 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 25 153 - -
Tpr5g0801 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 25 153 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0801 Tpr-Chr5 14041021 14043659 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr5g0801 B3 7.3e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0801 - - cam:101511251 239.58