Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0800 ATGATGAGTAAAACAAGTTGCATAATTTTCACCCTTGCGTCAATTCTTATACTTTCCTTAACCACCTTCATCATATATTTAATAATTGTCACCACGTTCCCATTCAATGTCAAGTTCCACATAACAAATTTTTCTCTCGAACAATTCAATCTCACAACCAACAACACCTTATATTACAACTTTAGGGTTAACATTACAGCAAGAAACCCTAACAACAATGGAAAAATTCATTATAGGAGGATCACAGCAGTTGCATGGTATAAAGATCATGATTTTGCATGGGTGAGTTTGACACCTTTTGATCAAAGCAAAAAGAGTACTAATTTACTTGGGCCAATAGTTTTTGAAGGGAACTATGTGATTAACCTTAAAGAAAAACAACTTAATGAATATAAAGAGGAGACCCGTGTTGGAATATATAAAGATTTGGCTGTAGATTTGGAACTTAAAATTAAAGCCAAATTTGGAGGGTTTAAGAGTGGCCATATTTCGTTAGCGCAATGTGGTCGTTTGAAAGTTCCTTTAATTTCTAATAGTGAATCATCATCACCACCTATTTTCAATGTTACAAGATGCAAGAAACGGTCTCAAGATCATAGTTCTTCGGTGTGGATTTTGAGTTCAAGATCAAGAAGAAGAACAAGAAGAAGAAGA 654 0.341 MMSKTSCIIFTLASILILSLTTFIIYLIIVTTFPFNVKFHITNFSLEQFNLTTNNTLYYNFRVNITARNPNNNGKIHYRRITAVAWYKDHDFAWVSLTPFDQSKKSTNLLGPIVFEGNYVINLKEKQLNEYKEETRVGIYKDLAVDLELKIKAKFGGFKSGHISLAQCGRLKVPLISNSESSSPPIFNVTRCKKRSQDHSSSVWILSSRSRRRTRRRR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0800 218 PANTHER HARPIN-INDUCED 1 16 197 - -
Tpr5g0800 218 Pfam Late embryogenesis abundant protein 64 164 IPR004864 -
Tpr5g0800 218 PANTHER OS05G0367900 PROTEIN 16 197 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0800 Tpr-Chr5 14024225 14027853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0800 36 151 SNARE and Associated Proteins AT1G32270 30.172 4.41e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0800 - - mtr:MTR_2g048270 234.187