Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0796 ATGAATAAAGGGAGTTTAGAACCCAATCTAAAACTCACTGTTCCTTCATCTAATCAAGCTTCTTTTGCAAAGTTCTTGACACAAAGTGGTACTTTTAAAGAAGGGAACTTGCTTGTTAATAAAGATGGAGTTAGAATTGTCTCTGAGAGTGAAGATGAAGCTCAACCACCAATCAAACCAGTTAACAATCAAATAAGCTTAGCAGAGATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTCCAACTGGTGCAACACAAATGGACTAATCAATTTTTTGCATTGAAGCAAATTCAAATGAATCTTGAAGAATCTACATGCAGGCGAATAGCGCAAGAGCTAAAAATCAATCAATCATCACAATGTCCTCATGTTGTTGTTTGCTACCAAACAATCTATTATAATGGCACCATATCAATCATCTTAGAGTATATGGATGGAGGGTCCTTAGATGATCTTCTTAACAAAGTTAAAACAATTCCAGAACCATTTCTTGCTGCCATTTGTAAGCAGGTGTTGAAGGGTTTGATGTATCTTCACCATGAGAAACACATTATTCATAGGGACTTGAAACCTTCTAATATATTGATAAATCATAGAGGGGAAGTAAAGATTACTGATTTTGGTGTAAGTATAATCTTGGAGACTACATCTGGTCAAGCAAATACTTTCATCGGTACATACAACTATATGTCTCCAGAAAGAATCAAACCAGGCGAACAAGGCTACAACTACAAAAGCGATATATGGAGTTTAGGACTGATGTTGCTCAAGTGTGCTACTGGGAGTTTTCCATATACTCCGCCCGATAATAGTGAAGGATGGGGAACTTTGTTTGAGCTTATTGAAGCCATTGTTGAAAAACCTTCACCTAGTGCTCCATCTGATGTATATTCTCCTGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAAGGGACAGACCATCGACGCGAAACCTATTGAGGCATCCTTTTGTGAACATGTATGATGACTTGGAGGTGGATCTTTCGGCTTATTTCTCCAATGCAGGGTCTCCACTTGCAACCATATAA 1071 0.3754 MNKGSLEPNLKLTVPSSNQASFAKFLTQSGTFKEGNLLVNKDGVRIVSESEDEAQPPIKPVNNQISLAEIDTIKVIGKGNGGIVQLVQHKWTNQFFALKQIQMNLEESTCRRIAQELKINQSSQCPHVVVCYQTIYYNGTISIILEYMDGGSLDDLLNKVKTIPEPFLAAICKQVLKGLMYLHHEKHIIHRDLKPSNILINHRGEVKITDFGVSIILETTSGQANTFIGTYNYMSPERIKPGEQGYNYKSDIWSLGLMLLKCATGSFPYTPPDNSEGWGTLFELIEAIVEKPSPSAPSDVYSPEFCSFISACLQKNPRDRPSTRNLLRHPFVNMYDDLEVDLSAYFSNAGSPLATI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0796 356 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Tpr5g0796 356 SUPERFAMILY Protein kinase-like (PK-like) 70 339 IPR011009 -
Tpr5g0796 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 356 - -
Tpr5g0796 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0796 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0796 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0796 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Tpr5g0796 356 PANTHER MAP KINASE KINASE 1 356 - -
Tpr5g0796 356 CDD PKc_MAPKK_plant_like 68 336 - -
Tpr5g0796 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Tpr5g0796 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0796 Tpr-Chr5 13909944 13914694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0796 27 354 MAP Kinase Kinase Gene Family AT4G26070 66.465 3.86e-166 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Tpr5g0796 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0796 K20603 - gmx:100789734 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3437 2 37797702 37802794 Tpr5g0796 5 13909944 13914694 PCT