Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0795 ATGGAGGAAATAAGTTCGACGGTCGCAGTGCCATTAACACTTGGGAATTTAATACAAAAGGAGTCAGTTATGACAAATCTTATGGCAAATACAGCAACAGTTTTAATATTAAATCCTACTACTTCAATTGAGGGTTGTCAATCCTTTTCTGTAGGAAGTGACGATAACGACGACACAGATATTAGTCTACAGCATAAAATATCAGTGTCTCTAGAGGTTAAGGAGAATCAAGTTGCAGCTGAAACGGTCGCAGAAATGGTTCTTGAAAGTGACAGTAATGGAAGAAATGATGATGAATTCATGATAGCTAATGATTTTCCGCGTATACATAATCCATCCTCTCAATCTGATGTTGGTAACAAAATCGGTTCTTTTAAGGAGGAGTCTGCAATTTCAAGGACTAATTTGTCAGAAATGAACACACCGAATACCGTCATGGTTGATGGTAGTAACCATGATCAGTCTGTTTTGTACGAGTCCGTGAAGAACATGGCTTCTGTTGTGATGAAACATGAGTGTAAGCCAGATGGTTCTGATACAAAACCAATTGATGTAGTTCATGAGATTCCAGAGAAGCAAACATGCACAACAAACTGTGATAATGCTTTGGAATTGAGCGATACTCCTCGTTGTGGTTTCTCATCGGTTTGTGGAAGGAGACAAGAAATGGAAGATGCTATTGTTGTTAAGCCTCAACTTTTTCAAGTACCTTCAATGATGTTAATGGATGACCATGTGAATGCAAACACAAAGCACTCACTAGCACACTTTTTTGGTGTCTTTGATGGACACGGGGGAAGTCAGATTGTGATGGCTTCACAGGTTGCCCATTACTGCCAGACACATCTTCATTCAGTTTTGATTGAGGAGATAGAAGCTGCAGAATCAAGTTTACCTGAAACTAATGAAAAGGAAAATTGGCAGGACCAATGGAAGAAAGTACTCACCAATTGCTTTAAAAAAGTAGATGATAAAATCGTAGGAGTTAATGCATATAATGGTGGAAGTAACAGTAATGACGGATCTGAGTCAAGTACTGAAGAAACTCTTGCTCCTGAGTGTGCTGGATCAACTGCACTGGTTGCAGTTTTAACTCAAACTCATATAATAGTTGCGAATTGTGGCGATTCAAGAGCAGTCTTATGTCGAGGGAAAGAAGCACTTCCATTGTCTACTGACCATAGACCAGATATAGAGGATGAGCAGGAAAGGATAGAAGCTGCCGGAGGAAAGATCATACAATGGAATGGATACCGTGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGATCCAGAAGTCAACTGCATCCTTAGAGAGAAAACAGACGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTCATAAAAAATGAAGAAGCCTGTGAAATTGCTCGAAAGCGAATCCTTATTTGGCATAAGAAGAATGGAACCAATATATCAACAGGACAAGTCGATGGAGTTGATCCTGCTGCTCAGTATGCTGCAGATTATCTATCAAAACTTGCCCTTCAAAGGGCAAGCAAAGATAATATCTCAGTTATTGTTATAGACTTGAAGGCTCAAAGAGAGTTCAAGAGAAAGGAATAA 1626 0.3954 MEEISSTVAVPLTLGNLIQKESVMTNLMANTATVLILNPTTSIEGCQSFSVGSDDNDDTDISLQHKISVSLEVKENQVAAETVAEMVLESDSNGRNDDEFMIANDFPRIHNPSSQSDVGNKIGSFKEESAISRTNLSEMNTPNTVMVDGSNHDQSVLYESVKNMASVVMKHECKPDGSDTKPIDVVHEIPEKQTCTTNCDNALELSDTPRCGFSSVCGRRQEMEDAIVVKPQLFQVPSMMLMDDHVNANTKHSLAHFFGVFDGHGGSQIVMASQVAHYCQTHLHSVLIEEIEAAESSLPETNEKENWQDQWKKVLTNCFKKVDDKIVGVNAYNGGSNSNDGSESSTEETLAPECAGSTALVAVLTQTHIIVANCGDSRAVLCRGKEALPLSTDHRPDIEDEQERIEAAGGKIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPDPEVNCILREKTDECLILASDGLWDVIKNEEACEIARKRILIWHKKNGTNISTGQVDGVDPAAQYAADYLSKLALQRASKDNISVIVIDLKAQREFKRKE* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0795 541 SUPERFAMILY PP2C-like 208 532 IPR036457 -
Tpr5g0795 541 Pfam Protein phosphatase 2C 211 524 IPR001932 -
Tpr5g0795 541 Gene3D - 198 541 IPR036457 -
Tpr5g0795 541 SMART PP2C_4 200 529 IPR001932 -
Tpr5g0795 541 CDD PP2Cc 210 531 IPR001932 -
Tpr5g0795 541 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 111 541 - -
Tpr5g0795 541 PANTHER ALPHABET, ISOFORM E-RELATED 111 541 - -
Tpr5g0795 541 ProSiteProfiles PPM-type phosphatase domain profile. 210 531 IPR001932 -
Tpr5g0795 541 ProSitePatterns PPM-type phosphatase domain signature. 257 265 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0795 Tpr-Chr5 13900257 13904487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0795 136 540 PP2C-type Phosphatase Gene Family AT4G26080 48.662 5.85e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0795 K14497 - gmx:100812974 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3436 2 37794105 37797325 Tpr5g0795 5 13900257 13904487 PCT