Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0793 ATGGCAAAGAAACGGCAACCAACCCCCGCCGCGTCCAAAGACGACGAACCACTCACCCCCGTCTCCAAGAATGACCAACCACTCACCTCCGCCTCAAAGAACGACCAACCGCCACCGTCCAAAAAGCCAGAAGAAGAAAAAAAAGATGAAGACGATGAAGACGAAGAAGAAACCGATACCGATTCTGATCAAGAACCACCTCCAAAACTCAAATCCATCAATTCAAAATCCAGTGATGAAACCCTAAAATCAAAGCCTCAACCAAAATCCTCTGCCGCACCGGCCAGATCTGGAACCAAACGTTCTGCTGAGAGTGACACCAAACTTGTAGACGAAGCTAAACAATCAAAGAAGAAGAAAACAACGGCCGCTGCTGATGATAAGAAAGAACAGGAGGAGGATAACAAAAAGCCCGGTGATGACTCAAAAAAATTGTTTCAGAGAGTTTTCAATGAAGATGACGAACTTGCAATTCTTGAAGGTCTAGTCGATTTTACTGCAAAAACAGGGAACGATCCAGCGAAATATCCCACAGCATTTTACGATGATGTGAAGAAGTCGATTCATTTTCCAGTTACACTTGAACAGCTGAAAGATAAGGTTCGGAGGCTGAAGTTGAAATTTGACAATAAGATGAAGAGTTGCAAGAATGGAAAGACTCCTACTTTCTCCAAACCTATTGAGGAGAAAATGTTTGAATTTGGCAAAAAGATTTGGGGTGGTAATGTTGTTGAAGAAAATGGAAAACCTGATGAGAAACCCTCTAAAAAGGGTGCTGTTAAGAAATCACCAACTACGAAGAAATTGGATATGGAACCTGATTTGTCCTTGGTGGCTTCCAAGGAAACTAGAAAGGAGAATCCCGGTTCGGGTTTTATTATGAATGAAATGCATCGATTTGACAAAAGTGTATCAGGTTTATTTGGGTCGGGCATGGATTTGCTGAAGAGCGGAGTGGAGTTGCTTGAGGAATCAAAGAGGATAGAGTTGGAGAAAAGATGGAAGGAGTTGCAAATTGCTGAATTGAAGGTTGTTAATATGCGAGCTGAGTTGTCTGAGAAGCAAAGTAGATTGATAATGGATGCGTTGATGTCTTCATCGAGCGATTAG 1110 0.4234 MAKKRQPTPAASKDDEPLTPVSKNDQPLTSASKNDQPPPSKKPEEEKKDEDDEDEEETDTDSDQEPPPKLKSINSKSSDETLKSKPQPKSSAAPARSGTKRSAESDTKLVDEAKQSKKKKTTAAADDKKEQEEDNKKPGDDSKKLFQRVFNEDDELAILEGLVDFTAKTGNDPAKYPTAFYDDVKKSIHFPVTLEQLKDKVRRLKLKFDNKMKSCKNGKTPTFSKPIEEKMFEFGKKIWGGNVVEENGKPDEKPSKKGAVKKSPTTKKLDMEPDLSLVASKETRKENPGSGFIMNEMHRFDKSVSGLFGSGMDLLKSGVELLEESKRIELEKRWKELQIAELKVVNMRAELSEKQSRLIMDALMSSSSD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0793 369 MobiDBLite consensus disorder prediction 22 37 - -
Tpr5g0793 369 Coils Coil 194 214 - -
Tpr5g0793 369 Coils Coil 337 357 - -
Tpr5g0793 369 MobiDBLite consensus disorder prediction 246 271 - -
Tpr5g0793 369 MobiDBLite consensus disorder prediction 243 271 - -
Tpr5g0793 369 PANTHER BNAANNG10740D PROTEIN-RELATED 36 365 IPR007592 GO:0006355
Tpr5g0793 369 PANTHER STOREKEEPER PROTEIN 36 365 - -
Tpr5g0793 369 Pfam Protein of unknown function, DUF573 146 240 IPR007592 GO:0006355
Tpr5g0793 369 MobiDBLite consensus disorder prediction 101 145 - -
Tpr5g0793 369 MobiDBLite consensus disorder prediction 1 145 - -
Tpr5g0793 369 MobiDBLite consensus disorder prediction 67 100 - -
Tpr5g0793 369 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0793 Tpr-Chr5 13870047 13871643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0793 27 345 GeBP Transcription Factor Family AT4G00390 33.832 7.55e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g0793 DUF573 2.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0793 - - cam:101509961 270.781