Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0789 ATGGCAAAGAAACGGCAACGAACCCCCGCCGCGTCCAAAGACGACGAACCACTCACCCCCGTCTCCAAGAATGACCAACCACTCACCTCCGCCTCAAAGAACGACCCACCGCCACCGTCCAAAAAGCCAGAAGAAGAAAAAAAAGATGAAGACGATGAAGATTCGTCATCTGAAGAAGCTTCTTCATCTGAAGGTGAAGAAGATGATGATTCAGAAGATGATGAATCAGAAGAAGAACAACCTCCTCCTTCAAAACCTGCTTCCAAAACCCCTCAAACCGATAATGATAAATCGGAATCCAAAAAAGATGAAGACGATGAAGACGAAGAAGAAACCGATACCGATTCTGATCAAGAACCACCTCCAAAACTCAAATCCATCAATTCAAAATCCATTGATGAAACCCTAAAATCAAAGCCTCAACCAAAATCCTCTGCCGCACCGGCCAGATCTGGAACCAAACGTTCTGCTGAGAGTGACACCAAACTTGTAGAAGAAGCTAAACAATCAAAGAAGAAGAAAACAACGGCCGCTGCTGATGATAAGAAAGAACAGGAGGAGGATAACAAAAAGCCCGGTGATGACTCAAAAAAATTGTTTCAGAGAGTTTTCAATGAAGATGACGAACTTGCAATTCTTGAAGGTCTAGTCGATTTTACTGCAAAAACAGGGAACGATCCAGCGAAATATCCCACAGCATTTTACGATGATGTGAAGAAGTCGATTCATTTTCCAGTTACACTTGAACAGCTGAAAGATAAGGTTCGGAGGCTGAAGTTGAAATTTGACAATAAGATGAAGAGTTGCAAGAATGGAAAGACTCCTACTTTCTCCAAACCTATTGAGGAGAAAATGTTTGAATTTGGCAAAAAGATTTGGGGTGGTAATGTTGTTGAAGAAAATGGAAAACCTGATGAGAAACCCTCTAAAAAGGGTGCTGTTAAGAAATCACCAACTACGAAGAAATTGGATATGGAACCTGATTTGTCCTTGGTGGCTTCCAAGGAAACTAGAAAGGAGAATCCCGGTTCGGGTTTTATTATGAATGAAATGCATCGATTTGACAAAAGTGTATCAGGTTTATTTGGGTCGGGCATGGATTTGCTGAAGAGCGGAGTGGAGTTGCTTGAGGAATCAAAGAGGATAGAGTTGGAGAAAAGATGGAAGGAGTTGCAAATTGCTGAATTGAAGGTTGTTAATATGCGAGCTGAGTTGTCTGAGAAGCAAAGTAGATTGATAATGGATGCGTTGATGTCTTCATCGAGCGATTAG 1272 0.4182 MAKKRQRTPAASKDDEPLTPVSKNDQPLTSASKNDPPPPSKKPEEEKKDEDDEDSSSEEASSSEGEEDDDSEDDESEEEQPPPSKPASKTPQTDNDKSESKKDEDDEDEEETDTDSDQEPPPKLKSINSKSIDETLKSKPQPKSSAAPARSGTKRSAESDTKLVEEAKQSKKKKTTAAADDKKEQEEDNKKPGDDSKKLFQRVFNEDDELAILEGLVDFTAKTGNDPAKYPTAFYDDVKKSIHFPVTLEQLKDKVRRLKLKFDNKMKSCKNGKTPTFSKPIEEKMFEFGKKIWGGNVVEENGKPDEKPSKKGAVKKSPTTKKLDMEPDLSLVASKETRKENPGSGFIMNEMHRFDKSVSGLFGSGMDLLKSGVELLEESKRIELEKRWKELQIAELKVVNMRAELSEKQSRLIMDALMSSSSD* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0789 423 Coils Coil 248 268 - -
Tpr5g0789 423 Coils Coil 391 411 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 297 325 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 300 325 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 49 79 - -
Tpr5g0789 423 PANTHER BNAANNG10740D PROTEIN-RELATED 41 419 IPR007592 GO:0006355
Tpr5g0789 423 MobiDBLite consensus disorder prediction 1 198 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 155 198 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 121 154 - -
Tpr5g0789 423 MobiDBLite consensus disorder prediction 101 116 - -
Tpr5g0789 423 Pfam Protein of unknown function, DUF573 200 294 IPR007592 GO:0006355
Tpr5g0789 423 PANTHER STOREKEEPER PROTEIN 41 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0789 Tpr-Chr5 13821952 13823630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0789 103 399 GeBP Transcription Factor Family AT4G00390 35.599 7.85e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g0789 DUF573 2.7e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0789 - - cam:101509961 274.633