Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0779 ATGGATGCAGAAGAAATTGCACGTTTAAGCGATGCAAAATTAATTGATTGCTACTTGAACCGTGTTGATAATCCTGGTAACATATTTAACTCTGAAAATGTTCTCCTAAATTACCTACCACACCTTTTCATACAAATATTTCTCGTCGTAGTTGCAACTCGTGTGATGTTTGGGATCCTCAAACCCTTACATCAACCTCATTTTGTTGCTGAGCTTCTTGCTGGTTTTATGATAAACATATATATTCCCATAATGGATGACACACCCTTTGGAATGGCACTTTCTGCAAAGGGAATCCTTGGATTTGAGACAATATCACAATTGGGTGTCATCTACTATGTCTTTGTCACTGGCTTAGAGATGAATTTAGACACATTACTAAGAGCAAGAAAAAAAGCATCAACTATTGCAATTGTTGGCACAATTATTCCAATGATATTAGGATTTGGAATATATTTTTTGGTTGAAAAATCATTCATAAAAAATGGTGAATTCAACAAAATCTCAGCTTATTTATTATGGTCATTGGTAGTTACTATCACAAGTTTTCCAGTTGTAGCTCACATTCTTTCAGATCTCAAGATTCTCTATACAGGACTTGGTAGAATTGCATTAACTTCAGCTACAATTAATGACTTTATCAATTGGGCAATGTTTATTTTTTTAATACCATTAATTATAAATGGTAAAAGGGGTATAGTATCAGTAATATTAACCATAGTTTTTAGTAATTTTTGTTACTTTGTATTACGTCCACCACTTAACAAAATATTAGAAGAAAAAACTGAAGAAAATGAGTGGGATTTGTACCAATTATCCTATGTATTAGTTGGTGTAATTGCATGTGCAACTGTGACTGAATTTCTTGGTACACATTCAGTTGTTGGAGCATTGATTTTTGGATTAATTCTTCCACGTGGCAAGTTTACAGAAATGTTGATTGAACAATCAGAGGATATTGGATCAGGGTATTTAGCACCATTGTTTTTTGCAAGTATTGGTATGAGAAGTAGAGTGGTTCCAATTTTACATGAAAATTTATTTTTGGCTATATATATTATGATCTTGTTAATTTGTGCTAAGATTGTGAGTGCTATAATTGCTACAAGGTTTTATGGAATGCCTATTAGAGATGGTATGGCTCTTGGAGTGATTATGAATACTAAAGGGATCTTATCATTGATTATACTAAACATTGGATGGAGTAGAAAGGTTGTGAGTGGAGAGGCATTTACAATTATGGTGTTCAGTATATTTTTTATGACAGTTGTAGTGGCTCCAGTCATCAATGTAATGTACAAACCAAGAGTGACATATGAGCAAAACAAGTTAAGGACAATAGAGAATTTGAAAGTTGATTCTGAGATTAGAGTTATGGCTTGTGTACACAATGTTCGCCAAGCCAATGGAATGATCCACATTCTTGAAGCTTGGAATGGCACAAATGTTTCGCCTTTACGCGTTTTCGGACTTCAACTTGTCGAACGCAAAGGACGTGCAACTGCGCTTCTTGTTGCACAAATAGACCAACAACAACAGTCTAGTTCCCTCCAAAATGGTTTACAAAGCGGAGATCAATTATCCGAAAAAAATAATTACTCATCCAACCATATCAACAATGTATTTGAAGAATACTCAACCAACAATGCTAACACACTTGTGGAAAATCTTGTTGCTATGTCGTCTTACTCAACAATTCATAAAGATATATACAATTTAGCGTTGCAGAAACAAGCGTCGTTGGTTATACTTCCTTTTCACAAACAAAACACTGCGGAAGGTACTCTTGAGGTAACCGATCCCGGCTTCAAAGTCATAAACCAAAATGTGATGCAAGATGCACCTTGTTCGGTTGGAATATTTGTTGACCGAGGTCACCACACATCGTTGTTCAAGACAAAAATGCGTATTCTTATGATTTTCATTGGTGGACCAGATGACAGGGAAGCGTTAGCAATTGCTTGGAGAATGTCAAAGCATCCGTGGACAAGGCTTACCATGGTGAGGATTCTTTTGTGTGGTAAAGTGGCCGAGGTTGACTCGAAGGGGTATAGTGAAGGAGGAGGACTATTATCTACTATTTTAGATACCGAAAAGCAAAAAGAGTTGGATGAAGAGTATGTTAATTCGTTTCGACTTACGGCAGTAAACAATGAAGATACTATAACTTATGCTGAAAGAGAAGTGCATACCGGTGAAGATATTTCGGAATTGCTTAATGAATTGGACAAGGTAGGTTATGATTTACATATTTTAGGTTATGGAAGAGGAAGAAACTCTTTGGTTTTGACAAATTTGTTGGAATGGGCTGATTGTCCTGAACTTGGTGTTATCGGTGACATGTTAGCATCAAATAGTTTTGGTTCAAATTCTTCAATATTTGTTGTACAACAATATGGATTTGGAGCAGTGGACTTCAAAAAAAGTCATTGTATTAAAGCAAAGTGTCAAAATGATGATGATATTGAAGCACTTTTCCCAAAGGCAGAATGA 2493 0.355 MDAEEIARLSDAKLIDCYLNRVDNPGNIFNSENVLLNYLPHLFIQIFLVVVATRVMFGILKPLHQPHFVAELLAGFMINIYIPIMDDTPFGMALSAKGILGFETISQLGVIYYVFVTGLEMNLDTLLRARKKASTIAIVGTIIPMILGFGIYFLVEKSFIKNGEFNKISAYLLWSLVVTITSFPVVAHILSDLKILYTGLGRIALTSATINDFINWAMFIFLIPLIINGKRGIVSVILTIVFSNFCYFVLRPPLNKILEEKTEENEWDLYQLSYVLVGVIACATVTEFLGTHSVVGALIFGLILPRGKFTEMLIEQSEDIGSGYLAPLFFASIGMRSRVVPILHENLFLAIYIMILLICAKIVSAIIATRFYGMPIRDGMALGVIMNTKGILSLIILNIGWSRKVVSGEAFTIMVFSIFFMTVVVAPVINVMYKPRVTYEQNKLRTIENLKVDSEIRVMACVHNVRQANGMIHILEAWNGTNVSPLRVFGLQLVERKGRATALLVAQIDQQQQSSSLQNGLQSGDQLSEKNNYSSNHINNVFEEYSTNNANTLVENLVAMSSYSTIHKDIYNLALQKQASLVILPFHKQNTAEGTLEVTDPGFKVINQNVMQDAPCSVGIFVDRGHHTSLFKTKMRILMIFIGGPDDREALAIAWRMSKHPWTRLTMVRILLCGKVAEVDSKGYSEGGGLLSTILDTEKQKELDEEYVNSFRLTAVNNEDTITYAEREVHTGEDISELLNELDKVGYDLHILGYGRGRNSLVLTNLLEWADCPELGVIGDMLASNSFGSNSSIFVVQQYGFGAVDFKKSHCIKAKCQNDDDIEALFPKAE* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0779 830 PANTHER CATION/H + ANTIPORTER 25 812 - -
Tpr5g0779 830 Gene3D - 40 441 IPR038770 -
Tpr5g0779 830 PANTHER CATION/H+ EXCHANGER 3 25 812 - -
Tpr5g0779 830 Pfam Sodium/hydrogen exchanger family 48 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0779 Tpr-Chr5 13571816 13575375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0779 10 799 Antiporter Super Family AT2G13620 36.750 3.81e-177 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0779 - - mtr:MTR_2g040100 1157.51