Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0771 ATGATTCATATCCGTAGTGGTTTATTGGTTGCAATTGCAACCTGCATTGTCTTGTTGGCTTACTACTTGAGCCAACACTCAGTACATATGGAACTACCTTTCTCTGATCTTCCTACTCAAGCATCCGAAGCTGACAAGGTGATCCGTTTACCGGATCAGCCTAAGGTTGACTTCCAACAGTTTGCTGGCTACATTACTGTTGACGAAGTCAACCAAAGGAACCTCTTCTACTATTTTGTTGAATCCGAGTTTGATGCTGTATCAAAACCTGTAGTCCTATGGTTAAGTGGAGGACCTGGCTGTTCTTCTATCGGCCAAGGAGCTTTTTCTGAGCATGGTCCTTTCCATCCCACCAAAAAGGGTGGTCTAGTAAAAAATCGGTACAGCTGGAACCGAGTGGCCAATATGCTGTATTTGGAATCCCCTGCAGGTGTTGGCTTTTCTTATTCCACCAACACCTCTGATTATTTCATGGTGAACGATGAGAGGACAGCAAGGGATTCCCTTGTTTTCCTCCAAGGTTGGTTCACCAGGTTCCAAAAGTACCAGAATAGTGATGTTTTCATTACCGGAGTAAGCTATGCAGGGCATTGGGCTCCCCAGATTGCAGAGCTCATTCTCCAGTCTAAACCAAGCTTCAATTTGAAGGGGATAGCTATGGGCAATCCTCTTCTGGAATTTACCACGGATTACAACTCTAGGGCCGAATTTTTATGGTCACATGGGTTAATATCTGTGGAAACATATGGCATGTTGCGGACTGTCTGCAACTATGCCCAAATTATGAGGGAAAATATATATGGGACACTTAGTACCACTTGTAAGCAAGTGTTGTATCAATTTTCCAAAGAGGTTGGTCGTCTTGTGGACTCCTTCAATATTATGGAAGACATTTGCCTCCCATCCGAGTTTCAATGGGTTAATGAGACTCCAATGGATGATGGAGAGAAAAGAGATGTGTGTGTGGAGCATGAAACCCCCTCGTACATGAACCGAGGAGAAGTGCGTGAAGCAATTCATGCAAAGCTGATGGGGATTACCGAGTGGACGATATGTAGTACTGTCCTCCTCTACAACCGGAAGAATTTTGAGGATCCGATCATATCTCTACTTGGGAGACTTGTTAAGTCCGGAGTAAGAGTAATGGTTTATAGTGGAGACCAAGATGCTTACCTTCCATTAATAGGGACACATTCTCTATTACAAGGATTGGCCAAGGATATTGGTCTGGACCGCGAGGGCCACAGATCCTGGTTTGATGGACCACAGGTTGCTGGATGGACCGAAACTTATGGGGACAACCTCACCTTTGCAACCATCAAAGGAGCAGGTCATGCAGCTGCAGCTTCTCAACCAAGGAGGTCCCTCCGGCTCTTTAAGAGTTTTATCGAAGGAAAACCTCTCCCAGTGAACATCACTGTACCATTTTAA 1431 0.4493 MIHIRSGLLVAIATCIVLLAYYLSQHSVHMELPFSDLPTQASEADKVIRLPDQPKVDFQQFAGYITVDEVNQRNLFYYFVESEFDAVSKPVVLWLSGGPGCSSIGQGAFSEHGPFHPTKKGGLVKNRYSWNRVANMLYLESPAGVGFSYSTNTSDYFMVNDERTARDSLVFLQGWFTRFQKYQNSDVFITGVSYAGHWAPQIAELILQSKPSFNLKGIAMGNPLLEFTTDYNSRAEFLWSHGLISVETYGMLRTVCNYAQIMRENIYGTLSTTCKQVLYQFSKEVGRLVDSFNIMEDICLPSEFQWVNETPMDDGEKRDVCVEHETPSYMNRGEVREAIHAKLMGITEWTICSTVLLYNRKNFEDPIISLLGRLVKSGVRVMVYSGDQDAYLPLIGTHSLLQGLAKDIGLDREGHRSWFDGPQVAGWTETYGDNLTFATIKGAGHAAAASQPRRSLRLFKSFIEGKPLPVNITVPF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0771 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 SUPERFAMILY alpha/beta-Hydrolases 39 469 IPR029058 -
Tpr5g0771 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 456 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 Gene3D alpha/beta hydrolase 41 300 IPR029058 -
Tpr5g0771 476 Gene3D - 321 357 - -
Tpr5g0771 476 Gene3D - 367 465 - -
Tpr5g0771 476 Pfam Serine carboxypeptidase 54 465 IPR001563 GO:0004185|GO:0006508
Tpr5g0771 476 PANTHER CARBOXYPEPTIDASE 30 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0771 Tpr-Chr5 13414035 13433936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0771 329 468 Calmodulin-binding Proteins AT2G22960 34.266 2.84e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0771 K16297 - gmx:100805028 530.406