Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0770 ATGGAACGTCGCGTTGGGAACAAGTTTCGTGTTGGTCGTAAGATCGGTAGTGGTTCCTTTGGAGAGATCTATTTAGGTACTAACATTCAAACTAATGAAGATGTTGCAATTAAGTTTGAAAATGTCAAGACAAAGAATCCTCAGTTGCTGTATGAGTCCAAGTTGTACAGAATACTGCAGGGAGAGCCTGGGATTCCATCTATTAAATGGTTTGGAGTGGAAGGAGATTACAATGTTCTAGTAATGGATCTTCTTGGACCTAGTCTCGAAGATATGTTTAACTTCTGTAATAGAAAGCTCTCGCTAAAAACAGTTCTCATGCTTGCTGAGCAAATGATCAAACGTGTTGAGTTTGTTCATTCTAAATCGTTTCTCCATCGGGATATCAAACCAGATAATTTCCTCATGGGCGTGGGAAAACGGGAAAACCAGGTTTACTGTATTGATTTTGGTTTAGCGAAGAAATATAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAGTCCGTTGGTTATGTCTTGATGTACTTCCTGAGAGGAAGTCTCCCTTGGCAAGGACTTCAAGCACGAACCAAGAGAGAAAAGTACGAGAAAATCCGTGATAAGAAGGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGCTATCCAACAGAATTTGCATCATACTTCCATTATTGCCGGTCATTGAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGCGACCTGTTTATTCGTGAAGGATTTCAGTCTGATTACGTCTTTGATTGGACTATCTTGAAGTATGAGGAATCACAGCGAGTCACTCCTCCGGCACGTCCTATGGGGCCTGGTGCTGGAACTAGTTCTGGAATGCCTCTTGCTATGGCTAATGCTAATAGACACACAGGAAGGGAAGAAGGGCGTCCTCCTGGTATGGCTTCAGTAGACAATTCAAGGCGAAGAATGTCGGGACCCATTTTAAATTCTGTAAATAATTCAAAGCAGAAAAATCCAATCTCTAATATGTTATCAGCTGCCACCAATGTCTTGGGTGAGTCAAGTGTGTCAAGGCGAGTTGGTGTTAGTAGTAGCCGCAATGCATTTGGTGGCGCTGATTCGGATCTTCGTGCTCGTGCCACTGAATCTAACCGTGGAAAATCAAACATAAATTCAACTGGACAAAGAAGTTCGCAAATTGGATCTTCGGATCCAAACAGAGTAGCACCATCTTCTAAACATGGTTCTTCTCATGTCAAGAATTATGAAAATACAGTCAAGGGCATTGAGGGTCTGAAATTATAA 1383 0.4165 MERRVGNKFRVGRKIGSGSFGEIYLGTNIQTNEDVAIKFENVKTKNPQLLYESKLYRILQGEPGIPSIKWFGVEGDYNVLVMDLLGPSLEDMFNFCNRKLSLKTVLMLAEQMIKRVEFVHSKSFLHRDIKPDNFLMGVGKRENQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESVGYVLMYFLRGSLPWQGLQARTKREKYEKIRDKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQSDYVFDWTILKYEESQRVTPPARPMGPGAGTSSGMPLAMANANRHTGREEGRPPGMASVDNSRRRMSGPILNSVNNSKQKNPISNMLSAATNVLGESSVSRRVGVSSSRNAFGGADSDLRARATESNRGKSNINSTGQRSSQIGSSDPNRVAPSSKHGSSHVKNYENTVKGIEGLKL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0770 460 MobiDBLite consensus disorder prediction 409 449 - -
Tpr5g0770 460 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Tpr5g0770 460 MobiDBLite consensus disorder prediction 380 460 - -
Tpr5g0770 460 Pfam Protein kinase domain 10 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0770 460 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 443 IPR030509 GO:0004672|GO:0005524
Tpr5g0770 460 MobiDBLite consensus disorder prediction 380 396 - -
Tpr5g0770 460 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0770 460 PANTHER CASEIN KINASE-RELATED 1 443 - -
Tpr5g0770 460 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Tpr5g0770 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tpr5g0770 460 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0770 460 MobiDBLite consensus disorder prediction 326 365 - -
Tpr5g0770 460 MobiDBLite consensus disorder prediction 348 365 - -
Tpr5g0770 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tpr5g0770 460 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0770 Tpr-Chr5 13282493 13290085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0770 7 213 EF-hand Containing Proteins AT2G17890 24.074 2.23e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr5g0770 Pkinase 9.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0770 K02218 - gmx:100811567 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3425 2 37698498 37704851 Tpr5g0770 5 13282493 13290085 PCT