Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0763 ATGTACAAGAGAACTCGAATCTGTGATTCAAACGAAATCAGCAACAGCAGTGGCATATGCTGCATAACTAACAATGCAGATGTCAATTCAATTGTTACAGATAACACAATCACACCACTATATCTTCTCTCAGACAATCTAGCATCAATCCTAGATGTTGCAGACTTTGACTTCTTTTCCGATGCAAAGATCATCACCGGTGACTGTAAACAAGTTTCGGTGCACCGGTGTATTCTCTCGGCGAGGAGTAGTTTCTTTAAGAACATGTTTGGTGGAACAAAAGAGAAAGTTACAAAGAGGATTGATTTGAAGGAAGTTGCTAAGGATTATGATGTTGGGTTTGATGCACTTAATGTTGTTCTGCGTTATTTGTATAGTGGCAAAGTTGAACACTCTTTGTCTGCTAAAGGTGTTTGTGTTTGTGTGGATGATGATTGTTCTCATTTTGGGTGTTGGCCTGTTGTTGATTTCTTGCTTCAACTGCTTTATGCTTCATTCACTTTTGAAATATCTGAATTGATTGCTCTTTATCAGGATCATCTACTAAACATTTTTGACAAGATTGCAATAGATGACATGTTAAAGGTTCTTTCTGTAGCAAATATATGTGGTAAAACATGTGATAAACTGCTAACAAGGTGCACAGAGAGAATTGTTAATTCCAATGTTGATATCACTACTCTTGAAAAATCACTTCCTCAACCTGTATCGAAACAAATAATCCACAAACGAAACGAACTCGGCTTAAACATATCCGAAACTTTAAATCTTCTACATAAACATGTTAACAGAATACATAGAGCACTAGATTCAGATGATGTAGAATTAGTGAGGTTACTTTTGAAAGAAGGACACACTACTCTAGATGAGGCTCATGCACTTCACTATGCAGTTGCATATTGTGATGTGAAAACTACTACTGAGCTTCTTGATCTTGGACTTGCTGATGTAAATCATAAAAACAATAGGGGTTATAGCGTGCTTCATGTCGCTGCAACAAGAAAAGAACCGAAGATTATGGTGTCTCTTTTAACAAAAGGAGCTCAGCCTTCTGAACTCACTTTGGATGGTAGAAAAGCTCTTCAGATTTCGAAGCGTTGTACAAAAGCTGTGAATTATTATAAATTTACAGAAGATGGAAACATTTCGTCGAATGATCGATTGTGTATAGAGATATTGGAGCAAGCTGAGAGACGGGAGCCTTTACTTGGGGAGGCTTCTCTTTCTCTTGCTATGGCCGGGGATGATTTGCGTATGAAATTGTTGTACCTAGAAAATCGAGTTGGACTAGCAAAACTGTTGTTTCCCATGGAAGCAAAGGTTGTGTTGGATATTACTCAAATTGATGGCACATCTGAATTTACTCCAAACTTGGGTGGTTGCCAGAGGACAACTATGGACCTAAATGAGGCACCTTTCAAAATAAAAGAGGAGCATCTAATTAGGATGAAGGCACTGTCTAGATCAGTGGAGTTAGGGAAACGCTTCTTCCCTCGTTGCTCAGCAGTGTTGAACAAGATCATGGATGCCGATGACCTATTGCAACTTGCGTGTATGGGTAATGACAGCCCCGAAGATCGACAAGCGAAGCGAAGACGGTACGTGGAGCTTCAAGAAGTTCTTAATAAAGTATTCCATGAAGACAAAGAGGAGTATGATAGATCTGCCATTTCTTCATCATCCTCATCCACATCAATAGGAATTGCAAGGCCTAATAATAGTAAGATAGCAACGAAGAATTAG 1743 0.3884 MYKRTRICDSNEISNSSGICCITNNADVNSIVTDNTITPLYLLSDNLASILDVADFDFFSDAKIITGDCKQVSVHRCILSARSSFFKNMFGGTKEKVTKRIDLKEVAKDYDVGFDALNVVLRYLYSGKVEHSLSAKGVCVCVDDDCSHFGCWPVVDFLLQLLYASFTFEISELIALYQDHLLNIFDKIAIDDMLKVLSVANICGKTCDKLLTRCTERIVNSNVDITTLEKSLPQPVSKQIIHKRNELGLNISETLNLLHKHVNRIHRALDSDDVELVRLLLKEGHTTLDEAHALHYAVAYCDVKTTTELLDLGLADVNHKNNRGYSVLHVAATRKEPKIMVSLLTKGAQPSELTLDGRKALQISKRCTKAVNYYKFTEDGNISSNDRLCIEILEQAERREPLLGEASLSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVVLDITQIDGTSEFTPNLGGCQRTTMDLNEAPFKIKEEHLIRMKALSRSVELGKRFFPRCSAVLNKIMDADDLLQLACMGNDSPEDRQAKRRRYVELQEVLNKVFHEDKEEYDRSAISSSSSSTSIGIARPNNSKIATKN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0763 580 Pfam Ankyrin repeats (3 copies) 266 350 IPR002110 GO:0005515
Tpr5g0763 580 SMART ANK_2a 289 319 IPR002110 GO:0005515
Tpr5g0763 580 SMART ANK_2a 323 352 IPR002110 GO:0005515
Tpr5g0763 580 SMART ANK_2a 260 288 IPR002110 GO:0005515
Tpr5g0763 580 MobiDBLite consensus disorder prediction 556 580 - -
Tpr5g0763 580 SMART BTB_4 60 185 IPR000210 GO:0005515
Tpr5g0763 580 Gene3D - 218 453 IPR036770 -
Tpr5g0763 580 ProSiteProfiles BTB domain profile. 60 133 IPR000210 GO:0005515
Tpr5g0763 580 Pfam NPR1/NIM1 like defence protein C terminal 365 564 IPR021094 -
Tpr5g0763 580 Gene3D Potassium Channel Kv1.1; Chain A 32 217 IPR011333 -
Tpr5g0763 580 SUPERFAMILY Ankyrin repeat 253 366 IPR036770 -
Tpr5g0763 580 CDD BTB_POZ_NPR_plant 42 184 - -
Tpr5g0763 580 PANTHER REGULATORY PROTEIN NPR3 3 575 IPR044292 GO:0009862|GO:2000022|GO:2000031
Tpr5g0763 580 PANTHER REGULATORY PROTEIN NPR2 3 575 - -
Tpr5g0763 580 MobiDBLite consensus disorder prediction 549 580 - -
Tpr5g0763 580 Pfam BTB/POZ domain 57 132 IPR000210 GO:0005515
Tpr5g0763 580 SUPERFAMILY POZ domain 51 183 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0763 Tpr-Chr5 13135120 13138045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr5g0763 NPR1_like_C 2.7e-82 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0763 K14508 - gmx:100800032 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0763 5 13135120 13138045 Tpr5g0763 5 13135120 13138045 ECH