Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0762 ATGTGTTCATCAAGCCTCAACAAATTTATGGGTGTTGTTCGAATCCTCTCTTCTGATACAATCAAGGCAACAAAATCAAATAATCATACAATTGATTTGACTCCATGGGATCTTCAGTTTCTAACTGCTTCACCCAACAAAAAGGGTCTTCTTTATCATCATCATCATCATCATCATCATCAGATAGTAGCAAACCAAATCCAACGGCTAAGACACTCTTTATCATCTTCTCTTTCCTTTTTTCAACCTTTAGCAGGTTGTCTTGAAATAACGGAACACGAAGATAGTGTTGCTTCGTGTTCCATAAAGTGCAACAATGCAGGTGTACTCTTTATCCATGCAGCAGCAGAAAATACTTCTGTTGCTGACATTCTTAGACCTACTTATGTTCCTTCGATTGTCAATTCATTTTTTGCTTTTAACGGAGTTAGAAACTACGAAGGCACGTCACAACCATTGTTGGCAGTGCAAGTCACAGAGCTAGTTGACGGCATCTTCATTGGTTGTACATTCAACCATGTGGCAGTTGACGGAAATTCCATGTGGCATTTTATCAATTCATGGGCCAAAATCTCACGCGGTTCTTGTGATCAAATATCCAAACCTCCAATACTTGAGCATTGGTTTCCAAATGGCATTCAACGTCCCATACAATTTCCTTTCACTATGGAGCCACAAAATAATTCCTCTGATACGCTGAGTCTTTCATCATCTGATGAAGAAGAACTCTGTATATCAGAGAGGTTATTCCATTTCAAAAAGGAGAAAATCGTGCAACTAAGATCGAAAGTCAATGCAGAGATTGGTAGTAGTACCAATAAAATATCTTCTCTACAAGCGCTTTTAACTCACCTTTGGTGTTCTGTGATCCGTTCCAAACAACTTAACCCACAAGAAGAAGTCCATCTTATGTTCATGATAGGAGTTAGACCAAGATTTGTTCCACCATTGCTAGAAGATTATTTTGGAAATGCAATTATAGGTTGTGGGATTAAAATGAAAGTTGGGGAGTTATTGAAGGAAGGTGGACAATGTAAAGGTGCTTTGGAGATGAACAAGTTAATTGCTACACACTCTAATGAGATGTTGAAGAATCACTATGAATCTTGGTTGAAACATCCAAGTTTCGTTAAGCTTGCCGGCATGACAAATAATAATTTCTTGGCCATTGGCCATTCACCTTGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCAGTTGCAGTTCATAATGGAAATAAAATAAATGGATTAGTTAATGTGTTTGCTGGAATAGAAGAAGGTAGTATTGATCTTAGAGTGTGTCTTCCGTATAAGAATTTGGAAACAATGGGAAATGACCCTCAATTTATGGCTATTGTTTCCAACTAA 1377 0.3776 MCSSSLNKFMGVVRILSSDTIKATKSNNHTIDLTPWDLQFLTASPNKKGLLYHHHHHHHHQIVANQIQRLRHSLSSSLSFFQPLAGCLEITEHEDSVASCSIKCNNAGVLFIHAAAENTSVADILRPTYVPSIVNSFFAFNGVRNYEGTSQPLLAVQVTELVDGIFIGCTFNHVAVDGNSMWHFINSWAKISRGSCDQISKPPILEHWFPNGIQRPIQFPFTMEPQNNSSDTLSLSSSDEEELCISERLFHFKKEKIVQLRSKVNAEIGSSTNKISSLQALLTHLWCSVIRSKQLNPQEEVHLMFMIGVRPRFVPPLLEDYFGNAIIGCGIKMKVGELLKEGGQCKGALEMNKLIATHSNEMLKNHYESWLKHPSFVKLAGMTNNNFLAIGHSPWFDVYGNDFGWGKPVAVHNGNKINGLVNVFAGIEEGSIDLRVCLPYKNLETMGNDPQFMAIVSN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0762 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 13 455 - -
Tpr5g0762 458 Gene3D - 12 215 IPR023213 -
Tpr5g0762 458 Pfam Transferase family 13 452 - -
Tpr5g0762 458 Gene3D - 225 447 IPR023213 -
Tpr5g0762 458 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 13 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0762 Tpr-Chr5 13131275 13132842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0762 68 438 Monolignol Biosynthesis Gene Families AT5G48930 27.110 1.85e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0762 - - mtr:MTR_4g022760 538.11