Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr5g0740 | ATGAAAAAGTCTCAAAATGAGAAAGCAACTTACAATGAACTTCGTGCTGAAAATGAAAGACTCCGCAATGAGAACATCCAGTTGAAGGAACAATTGGAGAATACTCTTTGCATAACATGTGGTCGTCCATTTTGTAAGAATCATGAAAACATGGAACAACTTTGTCTTGAAAATGCTCGTCTCAAAGAAGAGTCTCAAAATGAGAAAGCAACTTACAATGAACTTCGTGCTGAAAATGAAAGACTCCGCAATGAGAACATCCAGTTGAAGGAACAATTGGAGAATACTCTTTGCATAACATGTGGTCGTCCATTTTGTAAGAATCATGAAAACATGGAACAACTTTGTCTTGAAAATGCTCGTCTCAAAGAAGAGTCTCAAAATGAGAAAGCAACTTACAATGAACTTCGTGCTGAAAATGAAAGACTCCGCAATGAGAACATCCAGTTGAAGGAACAATTGGAGAATACTCTTTGCATAACATGTGGTCGTCCATTTTGTAAGAATCATGAAAACATGGAACAACTTTGTCTTGAAAATGCTCGTCTCAAAGAAGAGTCTCAAAATGAGAAAGCAACTTACAATGAACTTCGTGCTGAAAATGAAAGACTCCGCAATGAGAACATCCAGTTGAAGGAACAATTGGAGAATACTCTTTGCATAACATGTGGTCGTCCATTTTGTAAGAATCATGAAAACATGGAACAACTTTGTCTTGAAAATGCTCGTCTCAAAGAAGAGTCTCAAAATGAGAAAGCAACTTACAATGAACTTCGTGCTGAAAATGAAAGACTCCGCAATGAGAACATCCAGTTGAAGGAACAATTGGAGAATACTCTTTGCATAACATGTGGTCGTCCATTTTGTAAGAATCATGAAAACATGGAACAACTTTGTCTTGAAAATGCTCGTCTCAAAGAAGAGGTTGTTCGTGATCCTGCATTGGAGCTGTTGGTGTTGAAGAAAAAATGGTAG | 975 | 0.3733 | MKKSQNEKATYNELRAENERLRNENIQLKEQLENTLCITCGRPFCKNHENMEQLCLENARLKEESQNEKATYNELRAENERLRNENIQLKEQLENTLCITCGRPFCKNHENMEQLCLENARLKEESQNEKATYNELRAENERLRNENIQLKEQLENTLCITCGRPFCKNHENMEQLCLENARLKEESQNEKATYNELRAENERLRNENIQLKEQLENTLCITCGRPFCKNHENMEQLCLENARLKEESQNEKATYNELRAENERLRNENIQLKEQLENTLCITCGRPFCKNHENMEQLCLENARLKEEVVRDPALELLVLKKKW* | 325 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr5g0740 | 324 | Coils | Coil | 173 | 221 | - | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 66 | 125 | IPR042160 | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 188 | 247 | IPR042160 | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 248 | 311 | IPR042160 | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 2 | 64 | IPR042160 | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 126 | 186 | IPR042160 | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 | 66 | 125 | - | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 | 126 | 186 | - | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 | 248 | 311 | - | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 | 188 | 247 | - | - | |
| Tpr5g0740 | 324 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 | 2 | 64 | - | - | |
| Tpr5g0740 | 324 | Coils | Coil | 112 | 160 | - | - | |
| Tpr5g0740 | 324 | Coils | Coil | 4 | 38 | - | - | |
| Tpr5g0740 | 324 | Coils | Coil | 51 | 99 | - | - | |
| Tpr5g0740 | 324 | Coils | Coil | 234 | 282 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr5g0740 | 3 | 64 | Homeobox Transcription Factor Family | AT1G05230 | 45.312 | 2.27e-07 | 50.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr5g0740 | K09338 | - | tva:TVAG_192450 | 81.2629 |