Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0732 ATGTCTTTTGATCTTAATAATGAATTAGATCACAATCACCACCATCTCTTCAATTCAAATATTCATCAACCCTCTTCTTCATATTCCATACTCTTCAACCAAAATCAAGATCAAGGAAGATCTTATTCTTTGGAACCAAGTCACATACAAAGTGATGATCATTTAGAGGTTGAGAAGTTTGTTTCTTCTAATGGATCATGGGATCATCAAGAAATGAAGAAAGAAGATGAAAATGAAGATTATAAAGATGAGGATAGTACTTCATTGAAATGGATGCCATCAAAGAAGAGAATTATTCATAAAATGATGGAAGATCAAAGGGGTTCTAAGAACAAGTTTGAAAAAGAAAAGCTATTAGGATTTGATTATAGTAGCAACAACAATTCTTCAAACAACAACATCACTATTAGGGTTTGCAGTGATTGCCACACAACTAAGACCCCTCTCTGGAGAAGTGGACCAACAGGTCCTAAGTCACTATGCAATGCCTGCGGTATTCGACAAAGGAAAGCGCGACGCGCCCTTGCAGCAGCAGCATCTGCAAATGGTGAAACTCTTGTGGCGGCTGAGAAACCTAATTTGAAGGAAAAAAAGTTGCAAATCAAAAGGAAAAGGTCAAAAATTGATCAATGTGCACCGCATTTGAAAAGCAAGGGTAAAATTGGAAATAAATGTTTAACTTTTGAAGATTTGATAGCAAGTTTGAGTAACAATTTGACTGATCCTCATCAAGTTTTTCCTCAAGATGAGAAAGAAGCTGCAATTCTACTCATGGCTTTATCTTATGGCTTACTTCATGGATTTCCTTCTAATGGTTACTTAGATTAA 828 0.3575 MSFDLNNELDHNHHHLFNSNIHQPSSSYSILFNQNQDQGRSYSLEPSHIQSDDHLEVEKFVSSNGSWDHQEMKKEDENEDYKDEDSTSLKWMPSKKRIIHKMMEDQRGSKNKFEKEKLLGFDYSSNNNSSNNNITIRVCSDCHTTKTPLWRSGPTGPKSLCNACGIRQRKARRALAAAASANGETLVAAEKPNLKEKKLQIKRKRSKIDQCAPHLKSKGKIGNKCLTFEDLIASLSNNLTDPHQVFPQDEKEAAILLMALSYGLLHGFPSNGYLD* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0732 275 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 267 - -
Tpr5g0732 275 MobiDBLite consensus disorder prediction 62 88 - -
Tpr5g0732 275 SMART GATA_3 133 184 IPR000679 GO:0006355|GO:0043565
Tpr5g0732 275 ProSiteProfiles GATA-type zinc finger domain profile. 137 169 IPR000679 GO:0006355|GO:0043565
Tpr5g0732 275 Pfam GATA zinc finger 139 172 IPR000679 GO:0006355|GO:0043565
Tpr5g0732 275 ProSitePatterns GATA-type zinc finger domain. 139 164 IPR000679 GO:0006355|GO:0043565
Tpr5g0732 275 MobiDBLite consensus disorder prediction 68 88 - -
Tpr5g0732 275 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 1 267 - -
Tpr5g0732 275 CDD ZnF_GATA 138 166 IPR000679 GO:0006355|GO:0043565
Tpr5g0732 275 Gene3D - 135 211 IPR013088 GO:0006355|GO:0008270
Tpr5g0732 275 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 135 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0732 Tpr-Chr5 12313258 12315233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0732 28 267 C2C2-Gata Transcription Factor Family AT4G26150 36.395 1.49e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tpr5g0732 GATA 4.5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0732 - - lang:109328146 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3407 2 37556460 37558793 Tpr5g0732 5 12313258 12315233 PCT