Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0728 ATGGTCACAGATCTTGACTGGGAAACTTCTTTACCCTCTAACAATGAGTCAAAAATAAAGTCAAGTGAGCACAAACGTGAAACAATGTTCTTTGTCCTTGGAGGGTTAGTAGTTGTCACCATATTATTATTGATTCTTTGGATTGTATTTAGAAAGCATATTAAACGACCAACAAAGCCAATGAGAAACACGGTTCCGCATGAAGGGTCCATGGAGTTTTTTAGTAGGAGCCTTCGATCAATTAGCTACTTTGACTACCAAACATTGAGGAAGGCAACTAATAACTTTGTTCATGGTAATCTTCTTGGAAGTGGTGGATTTGGTCCTGTCTATCAGGGAAAGTTGGAAGATGGAAGGATGATTGCTGTTAAGGCATTATCACTTAACAAATCCCAACAAGGAGAAAAAGAATTTTTGGCTGAGGTGAAATTGATCACAAGTATGCAGCACAAAAATTTGGTTCAACTTCTTGGAAGTTGTATAGATGGACCTCAAAGATTACTTGTTTATGAATACATGAAGAATCGAAGTTTGGATCTCTTCATATATGGAAACGATGTTCGATTTCTAAATTGGAGCACTAGGTTCCAAATTATACTTGGAGTAGCGCGAGGACTTCAATACCTTCATGAAGACTCACACTTAAGAATTGTTCATCGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAAATTTTTACCAAGGATTGGAGATTTTGGACTAGCGAGGTTTTTCCCCGAAGATCAAGTTTATCTTAGTACACAATTTGCAGGAACATTAGGCTATACAGCTCCTGAATATGCTATTAGAGGAGAATTGTCAATAAAGGCAGATATATATAGTTTTGGAGTTCTACTTCTTGAAATTATTTGTTGCAGGAAAAACACAGATCATACTTTACCACCAGAAATGCAGTATCTTCCTGAATACGCATGGAAATTGTACGAGAAATCAAATTTATTGGACCTTGTGGATCCAAAGCTGAGAAAAGATGGATTCGTAGAAAAGGATGTTTTGCAAGCAATCCATGTAGCTCTCTTATGCCTTCAACCTCATGCACATTTGAGACCACCCATGTCAGAAATTGTAGCATTGTTAACATTCAAAATTGAAATGGTTACAACACCAATGAGACCAGCTTTCCTTGATCGAAGGCCCAAAAAGGATGAAGATGAACATTCTTTTGAAGGACCATCTTTGCCAAACCATTGA 1215 0.3728 MVTDLDWETSLPSNNESKIKSSEHKRETMFFVLGGLVVVTILLLILWIVFRKHIKRPTKPMRNTVPHEGSMEFFSRSLRSISYFDYQTLRKATNNFVHGNLLGSGGFGPVYQGKLEDGRMIAVKALSLNKSQQGEKEFLAEVKLITSMQHKNLVQLLGSCIDGPQRLLVYEYMKNRSLDLFIYGNDVRFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFLPRIGDFGLARFFPEDQVYLSTQFAGTLGYTAPEYAIRGELSIKADIYSFGVLLLEIICCRKNTDHTLPPEMQYLPEYAWKLYEKSNLLDLVDPKLRKDGFVEKDVLQAIHVALLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPKKDEDEHSFEGPSLPNH* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0728 404 ProSiteProfiles Protein kinase domain profile. 96 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0728 404 MobiDBLite consensus disorder prediction 382 398 - -
Tpr5g0728 404 PANTHER RECEPTOR-LIKE KINASE 75 380 - -
Tpr5g0728 404 CDD STKc_IRAK 102 368 - -
Tpr5g0728 404 Gene3D Phosphorylase Kinase; domain 1 59 172 - -
Tpr5g0728 404 SMART serkin_6 96 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0728 404 SUPERFAMILY Protein kinase-like (PK-like) 73 370 IPR011009 -
Tpr5g0728 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Tpr5g0728 404 MobiDBLite consensus disorder prediction 382 404 - -
Tpr5g0728 404 Pfam Protein tyrosine and serine/threonine kinase 99 365 IPR001245 GO:0004672|GO:0006468
Tpr5g0728 404 Gene3D Transferase(Phosphotransferase) domain 1 173 376 - -
Tpr5g0728 404 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0728 Tpr-Chr5 12197255 12202186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0728 6 397 Receptor kinase-like Gene Family AT1G56120 42.347 2.19e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr5g0728 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0728 - - cam:101498319 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3401 2 37521894 37524697 Tpr5g0728 5 12197255 12202186 PCT