Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0721 ATGGGTTGGGTTTCAGAATCTGCTTCTGTTGATGCTTTCAGTGAAATGATGTCATCGATGCCTGGTTTTCGATTTCATCCTACAGATGAGGAGTTGGTGATGTACTATCTGAAAAGGAAGATTTGTGGGAAGATGTTGAAATTCAATGTGATTTGTGAAACTGATGTTTACAAATGGGATCCTGAGGATTTGCCTTATCAATCTTTCCTGAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCACAGAGATAGGAAGTATCCTAATGGTGGAAGGTGTAACCGAGCAACTACACATGGATACTGGAAAACAACAGGAAAAGATAGAAATGTGATGTTTAATTCTCGGTTGGTTGGAGTTAAAAAGACACTGGTTTTCTATTTAGGCCGAGCTCCTAACGGCGAACGAACTGATTGGGTTATGCATGAATACACTATGGATGAAGAAGAGCTTAAGAGATGCCGTGATGTTAAGGAGTGTTATGCACTTTACAAGTTGTTCAAGAAAAGTGGACCTGGTCCTAAGAATGGCGAACAATATGGTGCGCCATTTAAAGAAGAAGATTGGTTAGATGACAATGTTGTAGATTTTAATGTTAAATCAGCTCAGCTGGAGGCTCCAAAGGATGATGTTCCTAACCCTTTTACTGATCAGCCACAAAAATTGGCTGTTGTTAATGCTTTTACCGATCAGCAGCAGCCGTTGTTTGGTGATGACATTGATGAATTCTTTAACGGGGCTTTTGATGTCTCGCCTGTCCTTGACCAGCAATATATTACCGATCAGCAGCAGCCGTTGTTTGGTGATGACATTGATGAATTCTTTAACGGGGCTTTTGATGTCACGCCTGTCCTTGACCAGCAATATATTACCGATCAGCAGCAGCCGTTGTTTGGTGATGACATTGATGAATTCTTTAACGCGGCTTTTGATGTCGCCCCTGTCCTTGACCAGCAATGTATTATTGGTTATACCGAATTTCCTCAGCTGTGTGATATTCAACAAAGTGTGGTCATGGGTCAATTTTATCTGTAG 1035 0.4106 MGWVSESASVDAFSEMMSSMPGFRFHPTDEELVMYYLKRKICGKMLKFNVICETDVYKWDPEDLPYQSFLKTGDRQWFFFCHRDRKYPNGGRCNRATTHGYWKTTGKDRNVMFNSRLVGVKKTLVFYLGRAPNGERTDWVMHEYTMDEEELKRCRDVKECYALYKLFKKSGPGPKNGEQYGAPFKEEDWLDDNVVDFNVKSAQLEAPKDDVPNPFTDQPQKLAVVNAFTDQQQPLFGDDIDEFFNGAFDVSPVLDQQYITDQQQPLFGDDIDEFFNGAFDVTPVLDQQYITDQQQPLFGDDIDEFFNAAFDVAPVLDQQCIIGYTEFPQLCDIQQSVVMGQFYL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0721 344 PANTHER NAC TRANSCRIPTION FACTORS 2 18 195 - -
Tpr5g0721 344 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Tpr5g0721 344 Gene3D NAC domain 28 172 IPR036093 GO:0003677|GO:0006355
Tpr5g0721 344 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Tpr5g0721 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 195 - -
Tpr5g0721 344 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0721 Tpr-Chr5 12099841 12101096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0721 19 199 NAC Transcription Factor Family AT1G34190 74.033 3.48e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr5g0721 NAM 7.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0721 - - mtr:MTR_1g097300 415.616