Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0716 ATGGAAGGAGAATTAAGCTGTGAAAATCCGGAGGTTACCAACTTGGATCTCGAAACGGACGATGTAAGTGACGGTAGTTACATGTCAAGTCCTGAACATGATAGCAATTCAAATGAATATGGAAGTGAACATGATGCTGGAAGTTATACTGCTGAAGAAGACACTGTTGTTATAAGAGACATGGCAGATATAAAGAAAATATCTTTAGAAAATTTTCATTTAACTGATATATCAAAATACGAATTTGCGAGCTTGGATGTGGCCTACAAGTTTTATTGTTGGTTTGCTAAAATGTCTGGGTTTTCTGTTCGCAAAGGCCATGTGATTAGAAATCGGGAGCGACATGTTTTGCAGCAAACATTTTTATGTTCCCGCGAAGGATTTAGACATTCGCAGGGTTTAAATCCGGAAGATCGACAACGTCAACAAAAGAACACAACAAGATGTGGGTGTATGGCAAAATGTAGAGTGCACATAGACATCAGATCCAGAAAATGGTATGTCACCGTATTTGAATTTGAACACAACCATGAGCTGTTGAATGGAACAATGTGTGGTTTTTTACCAGCATATAGGAAAATGGCTCAAGGTGATATAGATGAGATTGAGCGCAACCGAACGGCAGGGATAAGACCATATCAGGTGTATGGTTCGATGGCTAATGCATCTGGCGGTTTCCACAAAGTGGGGTTTGTTAAAAAGGATTTGTACAACCAAGTTGGGAAACAGCGCAAAGAAGTGTATTCTGATACGTGCCGTGCAGTGAGGTATCTCAGAGATCTCAGCACCAAAGACCCACTAATGTTTGTCACACATTCCATTGACTTAGAAAGAAGGCTTGAGCGGCTATTTTGGTGTGATGGGGAAAGTCGAAAGAACTACGAAATATTTGGTGATGTTGTGGCCTTCGATGCCACTTACCGGAAAAACAAGTACAATTGCCCGTTTGTTGTGTTTTCCGGGGTTAATCACCATAATCAGACCATAGTGTTTGCAACAGGTATTGTAACCCGAGAAACTGAAGAGACATATGTGTGGCTGCTAGAACAATTCCTGACTGCAATGAATGGCAAGCATCCGTTGTCAGTAATTACTGACGGGGACCTTGCAATGAGAAATGCTATTAGGAGGGTATTCCCCACTTCCCACCACAGATTGTGCGCATGGCATTTGTTAAGGAATGCATCGTCCAACATTGGGATTCCGGAATGTATGTCTCATCTCAAAAGATGTATGTTGGGTGACATGGAAGTTGAGAAATTTGAAAACCTTTGGTCTGAGATGGTTGAAAAATTTAGGTTGCAAGACAATAATTGGGTGAAGGATATGTACGAGAAAAGGAAAATGTGGGCGACCGCTCATATCAGAGGTAGTTTCTTTGCGGGTATAAGAACTACTTCTCGATGTGAAGCACTCCACAGCCACATTGGACAGTTTCTACACTCTCGGATCAATATGACTGATTTTGTTCAGCAATTTCACAGGTGCCTCACTTTTTTCCGTTTTAGAGAGATCGAGGCTGATTTCCAATCCAATTATGGCGAGCCAGTATTACAAACGAGCATGAGGTCCATTGAGAAATCTGCTGCTAAACAGTTTACAAAGGAGATATTTTTGTTGTTCCGCTCTATACTCAAGAACGCAGTGCTCCTACGTATTACAGGAAGTGTAGAACTGTCTATGGGGTATATTTTCAATGTTTCAAAATATTGCGGTGATGGCAGTGAATGGTACGTAACCTTTTGTGAAGAACCAATCGATTTTAAATGTTCTTGTTTGAGGATGGAATCTCTTGGATTGCCATGCGATCATATTTTAGCCACGATGCTGTATCTGGACTTTGATCAGCTTCCTGAGTGTTTAGTTTTGCCCCGGTGGTCAAAATATGCCAAAGATTCAATTCGTGATACTTATGCTAGTGGTTCCTTGTACTGGGATGCACAACCGGCTGCTAGATTTTCTGCCATTGTGCAGATGTGCAAAGTTGCTGCGGAGTTGGTGTTTAATGATTTAGAGGAGTATAATCACATTGTTGACATACTGGGTGGTGAAATAAGGCGGTTGAAACTTAAAAGAAACGACCAAAGTGGCGACCGAAGTGGTGAATTATCTCCAGTACTGCAGACGGGTATCGAAGAAGTGGATATTTTGAACCCTGATGTTGTTCGAACCAAAGGGTGTGGTGCAATGCCCAACGGGACGCCAAGCAATCATAGAAGTCATCGTAGCTGTGGAGTTTGTCGCGTGGTAGGTCATAACAAGCGTAGCTGTCCTCACGTCCATACGACCCCTCTTGGTGGAGATACACAATATTCGGCATCTGAATCAAGACACTACTATGACGATTCCTATGAGTTCGTTGGTCAATCTGGTTATGAAAGGCAATACTGA 2391 0.4203 MEGELSCENPEVTNLDLETDDVSDGSYMSSPEHDSNSNEYGSEHDAGSYTAEEDTVVIRDMADIKKISLENFHLTDISKYEFASLDVAYKFYCWFAKMSGFSVRKGHVIRNRERHVLQQTFLCSREGFRHSQGLNPEDRQRQQKNTTRCGCMAKCRVHIDIRSRKWYVTVFEFEHNHELLNGTMCGFLPAYRKMAQGDIDEIERNRTAGIRPYQVYGSMANASGGFHKVGFVKKDLYNQVGKQRKEVYSDTCRAVRYLRDLSTKDPLMFVTHSIDLERRLERLFWCDGESRKNYEIFGDVVAFDATYRKNKYNCPFVVFSGVNHHNQTIVFATGIVTRETEETYVWLLEQFLTAMNGKHPLSVITDGDLAMRNAIRRVFPTSHHRLCAWHLLRNASSNIGIPECMSHLKRCMLGDMEVEKFENLWSEMVEKFRLQDNNWVKDMYEKRKMWATAHIRGSFFAGIRTTSRCEALHSHIGQFLHSRINMTDFVQQFHRCLTFFRFREIEADFQSNYGEPVLQTSMRSIEKSAAKQFTKEIFLLFRSILKNAVLLRITGSVELSMGYIFNVSKYCGDGSEWYVTFCEEPIDFKCSCLRMESLGLPCDHILATMLYLDFDQLPECLVLPRWSKYAKDSIRDTYASGSLYWDAQPAARFSAIVQMCKVAAELVFNDLEEYNHIVDILGGEIRRLKLKRNDQSGDRSGELSPVLQTGIEEVDILNPDVVRTKGCGAMPNGTPSNHRSHRSCGVCRVVGHNKRSCPHVHTTPLGGDTQYSASESRHYYDDSYEFVGQSGYERQY* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0716 796 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 694 IPR031052 GO:0006355
Tpr5g0716 796 PANTHER OS02G0262500 PROTEIN 67 694 - -
Tpr5g0716 796 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
Tpr5g0716 796 MobiDBLite consensus disorder prediction 19 44 - -
Tpr5g0716 796 Pfam MULE transposase domain 300 394 IPR018289 -
Tpr5g0716 796 SMART 26again6 588 615 IPR006564 GO:0008270
Tpr5g0716 796 MobiDBLite consensus disorder prediction 1 49 - -
Tpr5g0716 796 Pfam SWIM zinc finger 589 612 IPR007527 GO:0008270
Tpr5g0716 796 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0716 Tpr-Chr5 11981642 11985321 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0716 MULE 1.5e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0716 - - ccaj:109791994 648.277