Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr5g0711 | ATGACGGAGCGAATTAAGTTCAGCGTATTATGCAGCTTATTAACATGGTCACAACGAACCAAATCGCCGGCGAAGAAACGCGCAAAGTTCCGGAAGTTTCTCGATTCTTTCTGCACCGATCGTAACTACTTTCCTGCAATTCGACTCATTCTTCCTAATCTCGATCGTGAACGTGGTTCCTATGGTCTCAAAGAATCCGTTCTCGCTACTTCACTTATCGATGCTATTGGTTTGTCCAAAGACTCGCACGACGCTCTTCGCCTTATCAATTGGCGGAAAGGTGGTTCTAAAACCGGTGCTAATGCCGGTAATTTCGCCCTTGTCGCCGCCGAGGTGCTGCAGCTTAGGCAAGGTACTGCTTCCGGTGGATTGACGATAAAGGAGTTGAATGACTTGCTTGATCAACTGTCTTCGAGTGAAAATAGGGCTGAGAAGACTTTGGTTCTTTCAACCCTTATCCAAAAGACAAATGCACAGGAAATGAAATGGATTATCATGATAATCCTGAAAGATTTGAAGCTGGGATTTAGTGAAAAAAGCATTTTTCATGAATTCCATCCAGATGCTGAAGACTTGTTTAATGTTACATGTGACTTAAAATTAGTTTGTGAAAAGCTAAGGGATCGGAACCAACGTCATAAGAGGCAGGATATTGAAATTGGAAAAGCTGTGCGTCCTCAATTAGCTAAGAGAGTTGCTAACGCAGCTCAAGCATGGAAGAAGCTTCATGGCAAGGAAGTGGTTGCTGAGTGCAAATTTGATGGTGATCGCATTCAAATTCATAAAAATGGAACAGAGATACATTTCTTCTCAAGGAACTTTATTGATCATTCTGAATATGCACATGGCATGTCGGAAATCATAATTCAAAACATTCTTGTGGATAGATGCATACTTGATGGTGAAATGTTGGTCTGGGATACATCCTTGAATCGTTTTGCTGAGTTTGGCTCTAATCAGGAAATAGCCAAGGCAGCAAGGGATGGGCTTGAGAGTAATAGACAGTTATGCTACGTTGCATTTGACATCCTTTATTTTGGAGATACTAGTGTAATTCACCAAACATTGAAGGAGCGGCATGAGATTCTACGTAAAGTTGTGAAGCCATTGAAAGGTCGTTTCGAAATTTTAATACCTAATGGTGGTATCAACAGTCATCCATCTTCTGGTGAACCATGTTGGTCATTTATTGCTCATAATGCAGATGAAGTTGAAAGGTTTTTCAAAGAAACCATTGAAAATAGAGACGAGGGAATTGTAGTAAAAGACCTCAGCTCCAAATGGGAACCTAGTGACCGCAGTGGAAAATGGCTAAAACTGAAGCCTGACTACGTTCAAGCTGGCTCTGATCTGGATGTACTTATCATAGGTGGCTACTATGGTTCCGGACGACGTGGTGGAGAGGTTGCTCAGTTCTTGGTGGGTCTTGCAGAGCGTCCATCCCCAAATACACATCCCAAACGATTTATCTCCTTTTGTAGAGTTGGTACCGGACTTTCTGATGATGAGCTTGAAGCAGTAATAACCAAACTAAAACCTTACTTCAGAAAGTATCCAAAGAAGATGCAACCAAGCTTTTATCAAGTTACTCATCATTCCAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAAAAATCAATTATTCTGTCTATAACCAGTGAAATCCGAACTATTGAATCTGAGGTATTCGCTGCACCTTACTCTCTGAGATTTCCTCGGATTGACAGGGTGAGATATGATAAGGCTTGGCATGAATGTCTTGATGTACAATCATTTATAGAATTGGTGCAATCTAGCAACGGTACCACACAGAGGGATCCAGAATATGGGACCAATGACAGTAAACCAAAACGCATGAAATCCTCTGTAAGGGGAGAAAAGAAAAACGTGTCCATTGTTCCTTCTCATTTAAGTCAAACTGATGTTTCCGGTGTTAAGGGAGGTTCCTTAATGTTTTCAAATATGATGTTCTACTTTGTTAATGTCCCTCCATCTCATTCTCTCGAGTCGTTCCATAAATTAGTTGCAGAGAATGGCGGCACTTTCTCAATGAATTTGAATAACTCAGTCACCCATTGTGTTGCAGCAGACAACAAAGGGTTTAAATTTGAAGCTGCAAAACGTCGTGGTGATGTCATTCATTATACTTGGGTATTGGATTGCTATGCACAAAAGAAGCTCATCCCCTTACAGTCGAAGTACTTCCTCTTCGTATCTGAACTGACCAAGAAGAAGTTACAAGAAGAAATTGACGAGTTCTCGGACTCTTACTACTTGGATCTTGATCTTCGAGACATAAAACAGCTCTTAAGCAATATTAATAGGTCAGAAGATGTCAGTACTGTCGACCATTACAGGAAAAAATACTGCCCAAAGGACAAGTGGTCTGTCTTCAATGGATGCTCCATTTATTTCCACACCACAATGCCATCATTGAAAGAAGATTGGCAAATTTTATTGGGACTTTCTTCAAAGAGATTCAAGCTTGAAGTTCTCATGGGTGGTGGGAAAGTCACCTCTAATCTTAAATCTGCAACTCATGTGGTGGCCTTGTTTGTACCAAGTTTTCATACCAACTATGATGACGAAATACATAGTAGTAGTTTTACTTCAGTTGAGAGAAAGCTTCTCGGTAGCAAGAAGTTGCATATAGTTAATTCCAAGTGGTTAGAAGATTGTTTGAATAGTTGCCAAAGATTATCAGAAGACACTTATAGCTTGAAGCCTTATGGAATAGAAGAATCAACTGCTGAGGATAGTGAACATGATGTGGCGGCAGATGTTCATCTGGTTGAAGATAATGTAAGAGACCGAAATGAATCTTTCTCCAACAAGGGAAGTAAGCAGAGTAGTGCCAAAGCTGCTTCTCAAGACAGTTTGGCTTTAGCATCACAAGAGAAGCGTGGCCCAAGGAAACGAGGAAGACCTGCGGGCACAGGTATTAAAAAAATAAAAACAGACAGAAACCAGGCTCGAAGAGCACGATCGCAAATTGCGAAAAAACGTGCTAAAATAAGTGAATATGAATCAGATGAAAGTGATTCTCTTGATATAAGACCATATGAGAAAGAGGCTGACATTACAGAAGGAAGTCTTGATTTTCACAATGAACATTCGAAACCACATGAGACTGAGAAAACTCATAATGTCCAAGGTACTGAAGTGGTAGAAAGTTCTGAACGAAACAAGGGATTCGAGCTAGAGGATTTCAAGGACAACCAATATGAAAAGATGTTTGTTCCCGAAATTGAAATGAATGACGTGCGCAATGACCATAGTAGTCAGGGGACTGAGAAACTTGAAATTATGACTGATCCTGTGCAGGCAATGTTACTTGACATGATTCCTAGCCTTGCCATGAACAAAGTTGAGCAACCTACGAATCGTAATATTGAGGAAGAGAAACGCCAGGTTCAGGAAGAGAAATGTCATGTTGAGGAAGAGAAGCCACCAGAAATCTCCAACGAACAGCCTCCGACTACAAAGAAAAAGAAAGTTAGCTTAAAGGCCATCGCCGGTGGTCTGCTCAATGATTGGTAG | 3543 | 0.4093 | MTERIKFSVLCSLLTWSQRTKSPAKKRAKFRKFLDSFCTDRNYFPAIRLILPNLDRERGSYGLKESVLATSLIDAIGLSKDSHDALRLINWRKGGSKTGANAGNFALVAAEVLQLRQGTASGGLTIKELNDLLDQLSSSENRAEKTLVLSTLIQKTNAQEMKWIIMIILKDLKLGFSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEIGKAVRPQLAKRVANAAQAWKKLHGKEVVAECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHGMSEIIIQNILVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLESNRQLCYVAFDILYFGDTSVIHQTLKERHEILRKVVKPLKGRFEILIPNGGINSHPSSGEPCWSFIAHNADEVERFFKETIENRDEGIVVKDLSSKWEPSDRSGKWLKLKPDYVQAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELEAVITKLKPYFRKYPKKMQPSFYQVTHHSKERPDVWVDSPEKSIILSITSEIRTIESEVFAAPYSLRFPRIDRVRYDKAWHECLDVQSFIELVQSSNGTTQRDPEYGTNDSKPKRMKSSVRGEKKNVSIVPSHLSQTDVSGVKGGSLMFSNMMFYFVNVPPSHSLESFHKLVAENGGTFSMNLNNSVTHCVAADNKGFKFEAAKRRGDVIHYTWVLDCYAQKKLIPLQSKYFLFVSELTKKKLQEEIDEFSDSYYLDLDLRDIKQLLSNINRSEDVSTVDHYRKKYCPKDKWSVFNGCSIYFHTTMPSLKEDWQILLGLSSKRFKLEVLMGGGKVTSNLKSATHVVALFVPSFHTNYDDEIHSSSFTSVERKLLGSKKLHIVNSKWLEDCLNSCQRLSEDTYSLKPYGIEESTAEDSEHDVAADVHLVEDNVRDRNESFSNKGSKQSSAKAASQDSLALASQEKRGPRKRGRPAGTGIKKIKTDRNQARRARSQIAKKRAKISEYESDESDSLDIRPYEKEADITEGSLDFHNEHSKPHETEKTHNVQGTEVVESSERNKGFELEDFKDNQYEKMFVPEIEMNDVRNDHSSQGTEKLEIMTDPVQAMLLDMIPSLAMNKVEQPTNRNIEEEKRQVQEEKCHVEEEKPPEISNEQPPTTKKKKVSLKAIAGGLLNDW* | 1181 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr5g0711 | 1180 | SUPERFAMILY | BRCT domain | 652 | 737 | IPR036420 | - | |
| Tpr5g0711 | 1180 | MobiDBLite | consensus disorder prediction | 939 | 1018 | - | - | |
| Tpr5g0711 | 1180 | CDD | Adenylation_DNA_ligase_IV | 214 | 446 | IPR044125 | GO:0005524 | |
| Tpr5g0711 | 1180 | ProSiteProfiles | BRCT domain profile. | 794 | 908 | IPR001357 | - | |
| Tpr5g0711 | 1180 | CDD | BRCT_DNA_ligase_IV_rpt1 | 652 | 738 | - | - | |
| Tpr5g0711 | 1180 | Pfam | BRCT domain, a BRCA1 C-terminus domain | 651 | 733 | IPR001357 | - | |
| Tpr5g0711 | 1180 | Gene3D | DNA ligase/mRNA capping enzyme | 220 | 443 | - | - | |
| Tpr5g0711 | 1180 | ProSiteProfiles | BRCT domain profile. | 648 | 736 | IPR001357 | - | |
| Tpr5g0711 | 1180 | Gene3D | BRCT domain | 663 | 777 | IPR036420 | - | |
| Tpr5g0711 | 1180 | MobiDBLite | consensus disorder prediction | 981 | 1018 | - | - |
Showing 1 to 10 of 36 entries
Functional genes information
Pathway information
Event-related genes