Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0665 ATGGAAGGCCAACAAAATAAACGCAAACGCGTTTATTCGGTTGAACCAAACAAAGTAATGCAAGCAAAATTTAGTAGAAACTATATTAACTATTTAGCACCAGCTTTGATGAAGATCAAGGAAAGAAGAAGTTCTATAGAAGCCAAGAATGTTGAAAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTTTTTTCATCTCAAGGTTTTGCTTGGAGTAATGCTCTAAAATTAAAGCTTCAAAAAGATGGTGGTGAAGGTTCATCAAGAATTAATTATCAACAAAATGACATGGGCCCACTTGATTTTTCTAAGAAAAATTGTTCAAAATTTGAGGCTAGTAAGATTTTGGAGGAAAAAAAATTGGTTGAAGAAAATGAGATTGTGGATGACCAATTGAGGTGTCTTAGAAAATTGATTCCAGGTGGAGAAGAGATTATGTGTGATGAACAAATGGTGAGTGAATTAGAGAGCTATGTAAGTTGTTTGCAAATGCAGGTGAATATTCTAAAGTGTCTCACTGATTAG 528 0.3409 MEGQQNKRKRVYSVEPNKVMQAKFSRNYINYLAPALMKIKERRSSIEAKNVENVVKYEVDMAMVFSSQGFAWSNALKLKLQKDGGEGSSRINYQQNDMGPLDFSKKNCSKFEASKILEEKKLVEENEIVDDQLRCLRKLIPGGEEIMCDEQMVSELESYVSCLQMQVNILKCLTD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0665 175 CDD bHLH_AtIBH1_like 124 174 IPR044549 GO:0006355
Tpr5g0665 175 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 174 IPR044660 GO:0006355
Tpr5g0665 175 PANTHER TRANSCRIPTION FACTOR BHLH146 3 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0665 Tpr-Chr5 10782684 10783756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0665 6 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 36.257 2.01e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0665 - - aprc:113852314 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3353 2 37101142 37101801 Tpr5g0665 5 10782684 10783756 PCT