Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0657 ATGTCGGATACTAGTAGTGCTACTACAACTACAATTGAGGTTGTTGTGGTCATAGTGGTAATTGTTGTTAAGGTTGCTATTTTGGTTTGCGTGTGTAGAAGAAGAAATCAAACGAGTGGTGGAACTATTAATCCAGTAGATACACAATTTATAACACTCACTATGGATAAATTTTTGAATGACATGGAAAGAGAGAAACCAATAAGATTCAGTGGTCAACAACTAAGAATTGCAACAGACAATTACTCCAACATATTGGGGTCAGGTGGATTTGGAACAGTTTACAAAGGAATTTTCAGTAATGGAACAATGGTAGCTGTGAAGGTTCTACGCGGTAGTTCTGGCAAGAAAATTGACGAACAATTTATGGCAGAAGTGGGAACAATCGGTCGAATTCATCACTTCAATCTTGTTAGGTTATATGGATTTTGCTTTGAAAGAAATTTGATAGCACTTGTTTATGAATACATGGGGAATGGATCACTTGATTGGTATTTATTTGACGAAAAAAAGGCTTTGGAATACGAAAAGCTTCATGAGATTGCAATTGGTACGGCGAAAGGCATAGCTTACTTGCATGAAGAGTGCCAACATAGAATAATCCACTATGATATAAAACCTGGAAATATTCTCTTAGATAAGAATTTTTATCCTAAAGTCGCTGATTTTGGTTTGGCCAAACTTTGCAACAGGGAAAATACTCACATAACAATGACTGGAGGAAGAGGGACGCCTGGTTACGCCGCACCTGAACTTTGGATGCCATTTCCTGTAACTCACAAATGTGATGTCTATAGTTTTGGTATGCTATTATTTGAAATAATTGGTAGAAGAAGAAACCTTGACATTAAGAATACTGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTAGAGGAAGCAATGATAGTTTGTGGAATAGAAAAGAAAAATAGAGAAATTGCTGAGAGAATGGTTAAGGTAGCTTTATGGTGTGTTCAATATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTAAAAATGTTGGAAGGTGCATTAGAAATTCCAAAGACTTTTAACCCATTTCAGTATTTGATGGATGGGACTAATATTACTACTCATTCAGTCCAAGGGTCAAATACCTATACAACTAGTGTATCTTCCTCTGCCTCTTCTGTTATGGTAAGTGATTCCAATATTGTATGTGCTACTCCTCTTATGAAGAAGTATGAAATTGAATTAGCATCTAGCATAGCATGA 1263 0.3626 MSDTSSATTTTIEVVVVIVVIVVKVAILVCVCRRRNQTSGGTINPVDTQFITLTMDKFLNDMEREKPIRFSGQQLRIATDNYSNILGSGGFGTVYKGIFSNGTMVAVKVLRGSSGKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDWYLFDEKKALEYEKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDIKNTESQEWFPIWVWKKFDAGLLEEAMIVCGIEKKNREIAERMVKVALWCVQYRPELRPIMSVVVKMLEGALEIPKTFNPFQYLMDGTNITTHSVQGSNTYTTSVSSSASSVMVSDSNIVCATPLMKKYEIELASSIA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0657 420 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Tpr5g0657 420 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Tpr5g0657 420 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 417 IPR045874 GO:0004672
Tpr5g0657 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Tpr5g0657 420 PANTHER PUTATIVE-RELATED 14 417 - -
Tpr5g0657 420 Gene3D Transferase(Phosphotransferase) domain 1 157 362 - -
Tpr5g0657 420 ProSiteProfiles Protein kinase domain profile. 80 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0657 420 SMART serkin_6 80 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0657 420 Pfam Protein kinase domain 84 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0657 420 Gene3D Phosphorylase Kinase; domain 1 54 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0657 Tpr-Chr5 10590811 10592856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0657 69 368 Receptor kinase-like Gene Family AT5G38280 42.492 1.04e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tpr5g0657 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0657 - - gmx:100803355 649.818