Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0656 ATGAGTTATCACTATCAGTTTCCTGACTCTCCTCCTACCTTTTATTCTTCATCAGACAATTTTGAATCACAATCTCAAACAACTTTTGACAGATTTGGTGATAGAGTTGATTCTACTATGAAATGGGCAGTAGCAGAATCTGTAGTATATGGAGTAGTGGTAATAATTGCTGTTACAGCAATAGTACATGCTATTATTCAGTGCTTGAAGAAAGCAGGAACAGCAATTCCAGCTTACAGTCAGATTTCAACCACAGAAAAAGATAATCAAATATCTTCAAACTCATTACATTCAACCAACAAAATTGAAGTTGTAATACCACAAGATTCAAAAGCTGAATTTCCAACCATGGAAAGATTCTTAAGCAACATCAATAGAGAAAAACCAATTCGATTCACTCCAGAAAAACTCGATGAAATTACAAAGAACTACTCAACCATATTAGGTTCTGGTGCTTTTGGTGTTGTCTTCAAAGGAGAATTTCCAAATGGAGAAAAAGTTGCTGTAAAAGTTCTAAACTATTTGGATATGGGAATGGAAGAGCAATTTAAAGCAGAAGTTAGCACAATTGGAAGAACTTATCATAATAATTTAGTCAAACTTTTTGGATTCTGCTTTCACCATGACACAAGAGCACTTGTTTATGAGTATGTTGAAAATGGTTCTTTAGATAAGTACTTATTTGGAAGCACGAATCGTGAAGTTGAGTTACGAAAGCTTCATGATATTGCAATTGGAACAGCTAAAGGAATTGCTTATTTACATGAGGAATGTCAACATAGAATAATTCATTATGATATTAAACCGGAAAATGTTCTTCTTGACATGAATTTAGTACCAAAGATAGCTGATTTTGGATTAGCGAAATTAAGGAGTAGAGAAAGTACAATTGTTATGAATACTCATTTTAGAGGAACAAGAGGTTACGCCGCGCCTGAAATGTGGAAGGCTTATCCAGTGACATATAGATGTGATGTTTATAGTTTTGGTATTCTTCTATTTGAAATCGTAGGGAGAAGAAGACATTTTGATTCTAGCTATAGTGAATCGCAACAATGGTTTCCAAAATGGACTTGGGAAATGTTTGAGAATAATGAATTTGAAATTCCTGAATTGGTTGTTATGCTCGCACTTTGTGGAATCGAAGAGAAAGATAATGAGATAGCCGAGAGAATGTTAAAGGTTGCTCTATGGTGTGTTCAGTATTCACCAAATGATAGACCTCAAATGAGTACTATTGTGAAGATGTTAGAGGGTGAAATAGAAATTTCTTCACCTCCATTTCCCTTTGAAAATCTTGTGCCGGCCGCTAAAGAAAATTTGACGACAGAAGGAAGCATTGCAGATTCTGATACAACTACGTCTTCGTGGAATACAGAATCTTTAAGAGAATTTGGTTTCAGAACCAAACACAATGTATTTGAGATTGAAACATGTTTGGAATGA 1446 0.3465 MSYHYQFPDSPPTFYSSSDNFESQSQTTFDRFGDRVDSTMKWAVAESVVYGVVVIIAVTAIVHAIIQCLKKAGTAIPAYSQISTTEKDNQISSNSLHSTNKIEVVIPQDSKAEFPTMERFLSNINREKPIRFTPEKLDEITKNYSTILGSGAFGVVFKGEFPNGEKVAVKVLNYLDMGMEEQFKAEVSTIGRTYHNNLVKLFGFCFHHDTRALVYEYVENGSLDKYLFGSTNREVELRKLHDIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMNLVPKIADFGLAKLRSRESTIVMNTHFRGTRGYAAPEMWKAYPVTYRCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWTWEMFENNEFEIPELVVMLALCGIEEKDNEIAERMLKVALWCVQYSPNDRPQMSTIVKMLEGEIEISSPPFPFENLVPAAKENLTTEGSIADSDTTTSSWNTESLREFGFRTKHNVFEIETCLE* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0656 481 PANTHER RECEPTOR SERINE/THREONINE KINASE 89 459 - -
Tpr5g0656 481 SMART serkin_6 142 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0656 481 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Tpr5g0656 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Tpr5g0656 481 ProSiteProfiles Protein kinase domain profile. 142 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0656 481 Pfam Protein kinase domain 146 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0656 481 SUPERFAMILY Protein kinase-like (PK-like) 122 418 IPR011009 -
Tpr5g0656 481 Gene3D Phosphorylase Kinase; domain 1 108 217 - -
Tpr5g0656 481 PANTHER RUST RESISTANCE KINASE LR10-RELATED 89 459 IPR045874 GO:0004672
Tpr5g0656 481 Gene3D Transferase(Phosphotransferase) domain 1 218 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0656 Tpr-Chr5 10517417 10530145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0656 131 458 Receptor kinase-like Gene Family AT5G38280 39.104 3.39e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tpr5g0656 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0656 - - gmx:100820269 632.484