Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0654 ATGAGTTATCACTATCAGTTTCCTGACTCTCCTCCTACCTTTTCATCAGGCAATTTTGAACCACAATTTTTACGAAATTTTGAACCTGGAATTCTTCATCAGGCTGAAATTTTTACGAAATTTGGTGATAGAGTTGATTCTACTATGAAATGGGCAGTAGCAGAATCTGTAGTATATGGAGTAGTGGTAATAATTGCTGTTACAGCAATAGTACATGCTATTATTCAGTGCTTGAAGAAAGCAGGAACAGCAATTCCAGCTTACAGTCAGATTTCAACCACAGAAAATGATAATCAAATATCTTCAAACTCATTACATGCAACCAACAAAATTGAAGTTGTAATACCAGAAGATTCAAAAGCTGAATTTCCAACCATGGAAAGATTCTTAAGCAACATCAATAGAGAAAAACCAATTCGATTCACTCCAGAAAAACTCGATGAAATTACAAAGAACTACTCAACCATATTAGGTTCTGGTGCTTTTGGTGTTGTCTACAAAGGAGAATTTCCAAATGGAGAAAAAGTTGCTGTAAAAGTTCTAAACTATTTGGATATGGGAATGGAAGAGCAATTTAAAGCAGAAGTTAGCACAATTGGAAGAACTTATCATAATAATTTAGTCAAACTTTTTGGATTCTGCTTTCACCATGACACAAGAGCACTTGTTTATGAGTATGTTGAAAATGGTTCTTTAGATAAGTACTTATTTGGAAGCACGAATCGTGAAGTTGAGTTACGAAAGCTTCATGATATTGCAATTGGAACAGCTAAAGGAATTGCTTATTTACATGAGGAATGTCAACATAGAATAATTCATTATGATATTAAACCGGAAAATGTTCTTCTTGACATGAATTTAGTACCAAAGATAGCTGATTTTGGATTAGCGAAATTAAGGAGTAGAGAAAGTACAATTGTTATGAATACTCATTTTAGAGGAACAAGAGGTTACGCCGCGCCTGAAATGTGGAAGGCTTATCCAGTGACATATAGATGTGATGTTTATAGTTTCGGTATTCTTCTATTTGAAATCGTAGGGAGAAGAAGACATTTTGATTCTAGCTATAGTGAATCGCAACAATGGTTTCCAAAATGGACTTGGGAAATGTTTGAGAATAATGAATTGGTTGTTATGCTCGCACTTTGTGGAATCGAAGAGAAAGATAATGAGATAGCCGAGAGAATGTTAAAGGTTGCTCTATGGTGTGTTCAGTATTCACCAAATGATAGACCTCAAATGAGTACTATTGTGAAGATGTTAGAGGGTGAAATAGAAATTTCTTCACCTCCATTTCCCTTTGAAAATCTTGTGCCGGCCGCTAAAGAAAATTTGACTACAGAAGGAAGCATTGCAGATTCTGATACAACTACGTCTTCGTGGAATACAGAATCTTTAAGAGAATTTGGTTTCAGAACCAAACACAATGTATTTGAGATTGAAACATGTTTGGAATGA 1458 0.3484 MSYHYQFPDSPPTFSSGNFEPQFLRNFEPGILHQAEIFTKFGDRVDSTMKWAVAESVVYGVVVIIAVTAIVHAIIQCLKKAGTAIPAYSQISTTENDNQISSNSLHATNKIEVVIPEDSKAEFPTMERFLSNINREKPIRFTPEKLDEITKNYSTILGSGAFGVVYKGEFPNGEKVAVKVLNYLDMGMEEQFKAEVSTIGRTYHNNLVKLFGFCFHHDTRALVYEYVENGSLDKYLFGSTNREVELRKLHDIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMNLVPKIADFGLAKLRSRESTIVMNTHFRGTRGYAAPEMWKAYPVTYRCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWTWEMFENNELVVMLALCGIEEKDNEIAERMLKVALWCVQYSPNDRPQMSTIVKMLEGEIEISSPPFPFENLVPAAKENLTTEGSIADSDTTTSSWNTESLREFGFRTKHNVFEIETCLE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0654 485 SMART serkin_6 151 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0654 485 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Tpr5g0654 485 SUPERFAMILY Protein kinase-like (PK-like) 131 422 IPR011009 -
Tpr5g0654 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Tpr5g0654 485 Gene3D Transferase(Phosphotransferase) domain 1 227 429 - -
Tpr5g0654 485 PANTHER RECEPTOR SERINE/THREONINE KINASE 98 463 - -
Tpr5g0654 485 ProSiteProfiles Protein kinase domain profile. 151 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0654 485 Pfam Protein kinase domain 155 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0654 485 PANTHER RUST RESISTANCE KINASE LR10-RELATED 98 463 IPR045874 GO:0004672
Tpr5g0654 485 Gene3D Phosphorylase Kinase; domain 1 117 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0654 Tpr-Chr5 10471986 10474448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0654 140 462 Receptor kinase-like Gene Family AT5G38280 40.000 4.97e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tpr5g0654 Pkinase 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0654 - - gmx:100820269 622.468