Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0653 ATGGAAAGGGAGAAGCCAATAAGATTTACTGGTCAACAACTAAGGATTGCAACAGAAAATTATTCAAACTTGTTGGGCTCAGGTGGCTTCGGAATGGTTTACAAAGGAATTTTCAATAATGGAATAATCGTAGATGTAAAGGTTCTACGAGGTAGCTCGAACAAGAAAATTGACGAACAATTTATGGCAGAAGTTGGAACAATTGGTAGAATTCATCACTTCAATCTTGTTAGGCTATACGGATTCTGCTTCGAAAGAAACTTGATAACACTTGTTTATGAATATATGGACAATGGATCACTTGATAGGTATTTGTTTGATGAGAAAAAGACGTTAGAATATGAAAAGCTTCATGAAATTGCAATTGGTACGGCAAGAGGCATAGCTTACTTGCATGAAGAGTGCCAACATAGAATAATCCACTATGATATAAAACCTGGAAATATTCTCTTAGATAAGAATTTTTATCCTAAAGTCGCTGATTTTGGTTTCGCCAAACTATGCAACAGGGAAAATACTCACATAACAATGACTGGAGGAAGAGGGACGCCTGGTTACGCCGCACCTGAACTTTGGATGCCATTTCCTGTAACTCACAAATGTGATGTCTATAGTTTTGGTATGCTATTATTTGAAATAATTGGTAGAAGAAGAAACCTTGACATTAAGAATACTGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAGAAAATTTAATGCTGGACTATTAGAGGAAGCAATGATAGTTTGTGGAATAGATGAGAAAAATAGAGATATTGGTGAGAGAATGGTTAAGGTAGCTTTATGTTGTGTGTTGTGA 822 0.3613 MEREKPIRFTGQQLRIATENYSNLLGSGGFGMVYKGIFNNGIIVDVKVLRGSSNKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLITLVYEYMDNGSLDRYLFDEKKTLEYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGFAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDIKNTESQEWFPIWVWRKFNAGLLEEAMIVCGIDEKNRDIGERMVKVALCCVL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0653 273 PANTHER PUTATIVE-RELATED 1 272 - -
Tpr5g0653 273 Pfam Protein kinase domain 23 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0653 273 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 272 IPR045874 GO:0004672
Tpr5g0653 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Tpr5g0653 273 Gene3D Transferase(Phosphotransferase) domain 1 96 273 - -
Tpr5g0653 273 SMART serkin_6 19 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0653 273 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Tpr5g0653 273 SUPERFAMILY Protein kinase-like (PK-like) 6 248 IPR011009 -
Tpr5g0653 273 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0653 Tpr-Chr5 10451966 10452787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0653 8 272 Receptor kinase-like Gene Family AT5G38280 40.809 2.40e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tpr5g0653 Pkinase 8.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0653 - - gmx:100803355 489.189