Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0651 ATGGTTGAGAATATGAAGAGAAGCAACTTTGAAGTGTTGGGAATGTGTTGTGCTTCAGAAGCAACACTTGTTGAAAGAATTTTGAAGCCTCTTCATGGAGTCAAAGTTGTCTCAGTCATTGTTCCTACAAGAACTGTTACTGTGGTGCATGATGTTCTTCTTATCTCAGAATCACAAATAGCTGATGCACTAAATACAGCAAGACTTGAAGCTAGTTTTAGACCACAAGGAGAGACCAATAATGAAAAGAAATGGCCTGACATAGTTACAATGGCATGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTATATATATCCTCCTTTAGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGATTCCCTAAAGTTCTATTAAGGGCTATAGCTTCCATTAGAGCTCTTACTCTTAATATCAACATTTTGGTTATCTTGGCAGTATGTGGTACTGCTGCTATACAAGATTTTACAGATGGTGGAGTCATCATCTTTCTGTTCTCCATTGCTCAGTGGCTTGAGACAAGAGCAACTCACAAGGCAATGGTTGCAATGTCTTCTTTAACAAACATGGCTCCTCAAATGGCTATTGTTGCTGAGACCGGCGAACGTGTTGATGTCAATGATGTTAAGATCAACACCATCCTTTCAGTTAAGGCTGGTGAGGCTATACCACTTGATGGAGTTGTGGTGGACGGAAAATGTGAAGTTGATGAAAAAATGTTAACAGGAGAGTCATTTCCTGTCACCAAAGAATTAGATTCTCTTGTTTGGGCTGGAACTATTAATATGAATGGATATATAAGTGTAAGAACTACAGTGTTGGCAAAAGACACAATGGTGGCTGGAATGTCAAGACTAGTTGAAGAAGCTTCTAGCAGAAAATCACAAGCACAAAGATTCATAGATAACTTTGCAAAGTACTATATACCTGTGGTTGTGTTGATTTCAGCTAGCATTGCAGTGGTTCCAGCAGCATTAAGAGTTCCTGATATTGAGCCTTGGTTTCATTTAGCACTTGTGGTTTTATTGAGTGGATGCCCTTGTGCTCTTATCCTCTCCACACCTGTTGCAATATTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTATTGTTGAAAGGTGGAGATTATCTTGAAACACTTTCAAGAATTAAGACAGTGGCTTTTGATAAAACAGGCACCATTACAAGAGGAGAGTTCATTGTAACAGATTTTAGTGCTGCAGATGACATCAACAATGAAACATTATTGTACTGGATTTCAAGTATTGAGAGTAAATCAAGTCATCCATTGGCAGGTGCCTTAGTGCAATATGCAATGTTGCATTCTATCAAACCAGTCCCAGAAAATGTGGAGAATTTTCAAAATTTTCCAGGGGAAGGAATTTCTGGTACAATTGATGGTAGGGATATCTATATAGGCAATAAGAGAATTGGTGTCAGAGCTGGCAGCAAAAAAGATGATTGTGATGTACAATTTCAAAGAGATGAAATTTCCTCCAAGAAACAATACTGTGGAGAAACTCAGGTTGGAGTTTTCAGCCTAGTTGATGCTTGTAGATCAGGTGCTTTAGAGGCAATGGAAGAGTTAACGTTATTAGGTGTGAGATCAGTCATGTTGACAGGAGATAGCTCACAGGTTGCTATGTATGTTCAGAGTCAGCTAAACAATGCTATAGACATTGTTCATGCAGAGCTTCTACCTCATGAAAAGGCACAAATCATTGAGAATTTCAAGAAAGAAGGGCCAATAGCCATGATAGGAGATGGCATTAATGATGCACCTGCATTAGCTACAGCAGACATAGGCATCTCAATGGGACTTTCTGGTACAGCTCTTGCAAACGAGACAAGTAACGCAATTCTCATGTCAAATGACATCCGAAAAGTACCCGAAGCAATTCGTTTAGCGAGAAAAACAACTCGAAAGCTTATAGAAAATGTCATTATTTCGGTTGGATTCAAATGTGCCATACTTGCATTGGCAATTGCAGGATATCCATTGGTTTGGCTTGCTGTTTTGACTGATGTTGGAACTTGTTTACTTGTGATTCTCAATAGTATGTTGATTTTACAACAAAATCACAAATATGATGAAAGAGAATCAACAAAGTCTAAATATGGTGATTTTTTTAAAGATAAGACCAAACCATTACTTAACAAGCAAAGTAATGTTGATGAGGAAAAAGGGCTTATTGGTAGTGAAGAGTGTGGTAAAGGGTGTTGTAAAAATGTCACACATCATGTGGAAACTACAACATCAAGCAAAGATGAATCTTTTGGAGTTTCAAAGTTGAGATTACTCAAGGGAAATGATAATGGAAACTTTATGTTCGTTGAAGTTCATGTTGTGAAACCTTGCAATGATTTTGTTTAG 2376 0.3813 MVENMKRSNFEVLGMCCASEATLVERILKPLHGVKVVSVIVPTRTVTVVHDVLLISESQIADALNTARLEASFRPQGETNNEKKWPDIVTMACGLLLALSFLKYIYPPLGWLALGSVAIGFPKVLLRAIASIRALTLNINILVILAVCGTAAIQDFTDGGVIIFLFSIAQWLETRATHKAMVAMSSLTNMAPQMAIVAETGERVDVNDVKINTILSVKAGEAIPLDGVVVDGKCEVDEKMLTGESFPVTKELDSLVWAGTINMNGYISVRTTVLAKDTMVAGMSRLVEEASSRKSQAQRFIDNFAKYYIPVVVLISASIAVVPAALRVPDIEPWFHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFIVTDFSAADDINNETLLYWISSIESKSSHPLAGALVQYAMLHSIKPVPENVENFQNFPGEGISGTIDGRDIYIGNKRIGVRAGSKKDDCDVQFQRDEISSKKQYCGETQVGVFSLVDACRSGALEAMEELTLLGVRSVMLTGDSSQVAMYVQSQLNNAIDIVHAELLPHEKAQIIENFKKEGPIAMIGDGINDAPALATADIGISMGLSGTALANETSNAILMSNDIRKVPEAIRLARKTTRKLIENVIISVGFKCAILALAIAGYPLVWLAVLTDVGTCLLVILNSMLILQQNHKYDERESTKSKYGDFFKDKTKPLLNKQSNVDEEKGLIGSEECGKGCCKNVTHHVETTTSSKDESFGVSKLRLLKGNDNGNFMFVEVHVVKPCNDFV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0651 791 Pfam E1-E2 ATPase 198 366 - -
Tpr5g0651 791 Gene3D - 379 638 IPR023214 -
Tpr5g0651 791 SFLD p-type atpase 371 640 IPR044492 -
Tpr5g0651 791 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 689 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tpr5g0651 791 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 757 - -
Tpr5g0651 791 SFLD Haloacid Dehalogenase 371 640 - -
Tpr5g0651 791 SUPERFAMILY HAD-like 386 688 IPR036412 -
Tpr5g0651 791 CDD P-type_ATPase_HM 94 689 - -
Tpr5g0651 791 Gene3D - 1 74 - -
Tpr5g0651 791 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 139 691 - -
Tpr5g0651 791 Gene3D - 177 291 - -
Tpr5g0651 791 SUPERFAMILY HMA, heavy metal-associated domain 3 77 IPR036163 GO:0046872
Tpr5g0651 791 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Tpr5g0651 791 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Tpr5g0651 791 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Tpr5g0651 791 SUPERFAMILY Calcium ATPase, transduction domain A 201 287 IPR008250 -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 511 522 - -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 533 543 - -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Tpr5g0651 791 PRINTS P-type cation-transporting ATPase superfamily signature 611 623 - -
Tpr5g0651 791 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 667 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0651 791 Pfam haloacid dehalogenase-like hydrolase 384 601 - -
Tpr5g0651 791 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 757 - -
Tpr5g0651 791 CDD HMA 10 72 IPR006121 GO:0046872
Tpr5g0651 791 Gene3D - 399 519 IPR023299 GO:0000166
Tpr5g0651 791 PRINTS H+-transporting ATPase (proton pump) signature 587 603 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0651 791 PRINTS H+-transporting ATPase (proton pump) signature 619 644 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0651 791 PRINTS H+-transporting ATPase (proton pump) signature 778 791 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0651 Tpr-Chr5 10344172 10353547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0651 3 760 Primary Pumps ATPases AT4G30110 56.827 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0651 K01534 - gmx:100815324 1243.02