Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0650 ATGGGAGCACAAAGCATTCAGCATACGCAAATTATTGAAATAAGCGGAGAACTTCCTGATACAGGTAGGAAAATTTGCGGAGAAGCAACATGTGAGTTCTCAGATGCGGGATCCATCTCGAAAAATTCTGTAGAACGATCAACTTCGATGCGAAAGCTTTTTATTGCAGTGTCGCTTTGCGTTATTTTCATGGCCGTTGAAGTAGTTGGTGGTATTAAGGCCAACAGTCTTGCTATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCTGCATTTGCCATCTCCTTATTTTCTATATGGGCCGGGGGATGGGAACCGAATCCACGTCAGTCATTTGGATTTTTTCGAATTGAGATTCTTGGTGCTTTGGTTTCGATGCAATTAATATGGCTGCTTGCTGGAATTCTGGTATATGAAGCCATTTCTAGACTCATTGCAGGTCCTCAAAATGTGGATGGTTTTTTAATGTTTGTAGTTGCAGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTGGTATTGGGTCATGATCACGGACACGGACATGGACATGGACATGGACATGATCATGGCCACGGACATGATCATCATGGCCACAGCCATGGTCTTTCAGTTTCTACCAGTCGTGATGTAAAGCATACAAAAGATGAGCATCATCACACACATGACGATCACACTCACCATCATGATGATGAAAAACATTCAAAAGATGAACACCACCATACTCATGAAGATCATGCACATCATCATGACCATGACCACAAAGATGTTACTGAACCACTTCTTGGTGAATCAAAAGCCAAATCAGAGAAGAAACGAAACATCAATGTACACGGGGCTTATCTCCACGTTCTTGGGGACTCTATCCAGAGTGTCGGAGTGATGATTGGTGGAGCCATCATATGGTATAAACCCGAATGGAAAATTGTTGATTTGATTTGCACTCTAATATTTTCTGTAATTGTTTTGGCCACAACTATCAACATGCTGAGAAACATTTTGGAAGTCCTGATGGAGAGCACGCCACGTGAGATAGACGCTACTCAGCTTCAAAAAGGGCTATTAGAGATGGAAGATGTTGTGGCTGTTCATGAGCTGCACATATGGGCCATAACAGTTGGGAAGATATTGCTAGCTTGTCATGTTAAAATCAATCCTGAAGCAGATGCTGACATAATGCTGGACAAAGTTATCGACTACATCAAGAGAGTTCATAACATTAGTCATGTAACGATACAGATCGAACGCTAG 1254 0.4179 MGAQSIQHTQIIEISGELPDTGRKICGEATCEFSDAGSISKNSVERSTSMRKLFIAVSLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAISRLIAGPQNVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHGHGHDHGHGHDHHGHSHGLSVSTSRDVKHTKDEHHHTHDDHTHHHDDEKHSKDEHHHTHEDHAHHHDHDHKDVTEPLLGESKAKSEKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEDVVAVHELHIWAITVGKILLACHVKINPEADADIMLDKVIDYIKRVHNISHVTIQIER* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0650 417 Gene3D Cation efflux protein transmembrane domain 49 338 IPR027469 -
Tpr5g0650 417 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 417 - -
Tpr5g0650 417 Pfam Cation efflux family 53 339 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tpr5g0650 417 PANTHER METAL TOLERANCE PROTEIN A1 1 417 - -
Tpr5g0650 417 TIGRFAM CDF: cation diffusion facilitator family transporter 50 417 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tpr5g0650 417 MobiDBLite consensus disorder prediction 197 258 - -
Tpr5g0650 417 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 340 IPR027469 -
Tpr5g0650 417 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 416 IPR036837 -
Tpr5g0650 417 MobiDBLite consensus disorder prediction 182 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0650 Tpr-Chr5 10340742 10360584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0650 253 417 Inorganic Solute Cotransporters AT2G46800 82.249 8.86e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0650 K14689 - gmx:100794876 565.074