Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0610 ATGGAAGATGCAAATAAGAAGGGAGATGAAGAAGTTAAGTACCGTGGTGTTAGAAGAAGGCCATGGGGAAAATTTGGGGCAGAGATTAGGGATCCAACAAAACCTACCGGAAGACAATGGTTAGGAACATATGACACAGCCGAGGAAGCTGCGAGAGCTTATGATTGTGCTGCCATTCGTTTGCGGGGTGCTCTTGCCATTCTTAATTTTCCTGATGAATATTATTTTCATCTTTCTTCTTTATCATCGTCGTCGATATCATCATCTACTTGTGGCATTGCAAGCAGTTCTTCTACACAACATAAGGAAGTTATTGAGTTTGAGTATTTGGATAATAAGGTGTTGGAAGATCTTCTTGCTCCGTCGAAAGAAGAGAATGAAAATAAAAATCATTAA 396 0.3965 MEDANKKGDEEVKYRGVRRRPWGKFGAEIRDPTKPTGRQWLGTYDTAEEAARAYDCAAIRLRGALAILNFPDEYYFHLSSLSSSSISSSTCGIASSSSTQHKEVIEFEYLDNKVLEDLLAPSKEENENKNH* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0610 131 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Tpr5g0610 131 PANTHER DNA-BINDING DOMAIN 1 124 IPR044808 GO:0003700|GO:0009873
Tpr5g0610 131 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Tpr5g0610 131 SUPERFAMILY DNA-binding domain 13 73 IPR016177 GO:0003677
Tpr5g0610 131 PANTHER ETHYLENE RESPONSE FACTOR 1 124 - -
Tpr5g0610 131 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Tpr5g0610 131 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Tpr5g0610 131 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Tpr5g0610 131 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Tpr5g0610 131 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0610 Tpr-Chr5 9409484 9411582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0610 9 119 AP2-EREBP Transcription Factor Family AT3G23230 59.322 4.44e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr5g0610 AP2 4.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0610 - - gmx:100796977 156.762