Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0602 ATGGAGATGAGTTGCCCATTAAATGTTAATAGCAACATTCCCGTGTGCTCTACTAGCACAGTTAATACTTCACACTCACACCAGAGTTTCTGTGGCTTTGTGCAACAGCCTTCTTTTGTGAGTGGATGGATGTATGTGAATGAACAGGGACAAATGTGCGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACAGGTTTCTTGCCATTTGAGCTTCCTGTGTATCCTGTGATCAATGGTACAATAATGAGCCCTGTACCATTGAATTATTTCAAACAGTATCCTGACCATGTTTCCACTGGATTTGTGTATCTAAGTATGGATTTATCAGACACAAGGATGTCTACAAATTACCCCTCTTCTTCTCAGGATATGCCTGCTAACCCTGATTCAAAGTCTGTTTCACAGTCACATGTCAATGACTGCAATAAGGAATCCAATCACATGAATTTAAACTCTGAGGCATTCAGCAAGATAATTTCTTGTCAGATGTTGGGAGGAGAATGCTGTTGGCTTTATGAAGATAAAAAGGGTATGAAACATGGCCCACATTCCATTTCTGAATTGATTTCCTGGCACCACCATGGATATCTTGAAGATTCAACAGTGGTCTCTCATTTTGACAATAAATATGGAACCTTTGTGTTGCTGTCTGCTGTAAATGCATTGAAAGGAGATACATCTGGAACCATCTGTGGACCAGATTCCAAAAGCAACGGAGTTGGTGATGTGATGAACTTAATTTATGAAATATCTGAAGACATTTCTTCTCAATTGCACATGGGTGTAATGAAAGCTTCCCGTAGAGTTATGCTAGATGGGATTATTGGCGACATCATTGCAGAATTTGTTACTGAAAAGAAAAGCAAGAAGCACAAGCTTGAGTCTGCTGATCGAACTTATGAAACTTGCATGTTGGACAATAAAATGATGAATAAAGGTACTTCCATTCCAAGTGAGCCTGAACCTTCCCATATTTTGGACGGCCAGGCTTGTCATGAAATTTCCAAACTGTCTTCAACGAGTCTTAAGTCAGTTGGAAGCATTGAAAATTTCTGGTGGTCATATGCTGCTGTTCGTAAAGTACTTTTTGATCACTGCATGCAAAAAGCGTGGAATGACGTGTTTTTTGACACGGTATCAGAGTACTTTTTGTCCTGGAGGAAGAGAAAACTTTGGTCTCATCCTAAGCTTCAGTCATCTGTTAATGAATCTAAAGATTATGTTGAAAAGATTAAATCAAAAGCTTTGGTTCTCAGGCCAGGTTCCTCTGTATGCAATGTTGATGCTAATATCCAGTCTGGAGTGATGGCGACAGAAATAGATGGTCATCCTGAGTTATTTGTATCTCCTAATAACCTCAAAAGTGAAAATATAGCAGAAGGTCAAAGAATTTCATGCAGTTATCCTAACTCTAAAGATTTGACATGCATTCTTGAAAGTGTGCAGAACGAGCTTCACTTCTCTGCAAAGGTGTCTTTAGCTGATTATGTTCGAAGTGTTGTTGAAAAGGAAGTAAGCCAATTAATTCCTTCCCTAGAAAAAGACAAATTTAGTGAGTTGCAGGTTGATGTTAGTGACTGCCGTATCTCAGAGATGCTTACCGGTAAAACATTTGTTAAAGAAATTCTAAATGATAAGTCCATCGATCCTGTGAAAAATGGAGACTCAATTTGTGTGCCTTCATCTGGAAACCACATGTCTAATGTATTCTCAAAAGCATTTCAAGAATTGTGTGGACATTCAAATGATGTGGCTGATGAAGAGGAGATTGGTGACCTACCACCTGGATTCGAGAAGAACTCTCAAACAATATTCCCACACTGCAATTCAAAATTTCGACCTTCAAGATTAGTTGAATGTAATCCTAAGATTACAGAATATGTTGCAGCTGCATTGTGCAGACAGAAGCTGCATGATGAAGTTCTAGAAGAGTGGAAGTTTTCAATTCTCGATTCTACCATAAAGAAAAAATTTCAGTCTCGTGGTCATGAGAAGCGGAAGTCATTCAATTCAAGCAAGGAGCATTTGAATGATGCTACTTCTGTACTGGGAAAAGTGAAGGAAGGAACAAAAAGTTCCAGAGTTCCGCTGGCGACCGGAAAGCATACATATCACCGTAAGAAGCTGTCACGGAAAGAGTTATGCTCCTTTCAGCCAGTTGTAGAAGATAATTCAGGGCCAGGGAAGCAGCCTCTGGCTAAGTTAAGGAAACATGTTTCTGGAGATGTGAAGGAGAGTGCAGAAGTTAAAATAACCGCTATTAAAAGTGGAAAGGCTAAGATGATTAAAGGGAAGAAGGATACATCCTCTAAGAGCAGGTCTTCTGTCAATGTAGATAATAGCTCACCCAGTGATCAATTATCCTTGAAGAAAACTAGCCCGAAAGTTTTGAAGTTTGCGTGTACAGTTCAAAACGGTGTTACGGATGTTGTGATGTCTAATGGAAAGAAGCTATCAGTGTCAACAGATAATAGTGTTGGTATGAAGGTGGTTAAAAGAAATAACTCGGATGGCACCAATCCCAGGAAGACCAATGGTCATATCTCCTTAGAGAAACTAAGTGACGGTGTTACGGATGTTGTGAAGTCTAATGGAAAGAAGCTATCAGTGTCAACAGATAATAGTGTTGGTATGAAGGTGGTTAAAAGAAATAACTCTGATGGCACCATTCCCAGGAAGACCAATGGTCATATCTCCCTAGAGAAACTAAGTGCGACAAATAAAGTATCAAAATCAAAAAGAAAGCATCAAGCAGATGGTGTTACATCCTCACATCCTTCTAAGGTTTTGAAAATTTCAAATAGGGGTGCAAGTCTGGGAGCTAGCAAACAAGTAACTGAGGCACGGAGAAATTCTGCTCCCAAGTCATTGGATTTATGTCCTAGATCTAATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCGTAAGTGGTCTCAAAATGCTAGTCCTGCATCCAGAGCACGTGTGAGGGGTCTTCCACGTTCACAAAACAAGCGCATAGATTCTGAAAATAATTCATCCCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACGAATAGGGTGAAATTGCGTAACCTTCTTGCTGCAGCTGAGGGTGCAGATCTTCTGAAAGTGCCTCAACTGAAGGCACGGAAAAAGCGATTACGTTTTCAAAGGAGCAAGATACACGACTGGGGTCTTGTTGCCTTGGAGCCAATAGAAGCAGAGGACTTTGTGATTGAATATATTGGAGAATTAATTCGCTCTCGGATATCTGATATACGAGAGCTTCAATATGAGAAGATGGGAATCGGAAGCAGTTACCTCTTCAGACTCGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCCAACTGTTACACAAAGGTTATAGCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAAAAGCTGGTGAAGAGATTACATACAATTATAAGTTTCCCTTGGAGGACAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGTCGCGGATCAATGAATTAG 3576 0.4002 MEMSCPLNVNSNIPVCSTSTVNTSHSHQSFCGFVQQPSFVSGWMYVNEQGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMSPVPLNYFKQYPDHVSTGFVYLSMDLSDTRMSTNYPSSSQDMPANPDSKSVSQSHVNDCNKESNHMNLNSEAFSKIISCQMLGGECCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTVVSHFDNKYGTFVLLSAVNALKGDTSGTICGPDSKSNGVGDVMNLIYEISEDISSQLHMGVMKASRRVMLDGIIGDIIAEFVTEKKSKKHKLESADRTYETCMLDNKMMNKGTSIPSEPEPSHILDGQACHEISKLSSTSLKSVGSIENFWWSYAAVRKVLFDHCMQKAWNDVFFDTVSEYFLSWRKRKLWSHPKLQSSVNESKDYVEKIKSKALVLRPGSSVCNVDANIQSGVMATEIDGHPELFVSPNNLKSENIAEGQRISCSYPNSKDLTCILESVQNELHFSAKVSLADYVRSVVEKEVSQLIPSLEKDKFSELQVDVSDCRISEMLTGKTFVKEILNDKSIDPVKNGDSICVPSSGNHMSNVFSKAFQELCGHSNDVADEEEIGDLPPGFEKNSQTIFPHCNSKFRPSRLVECNPKITEYVAAALCRQKLHDEVLEEWKFSILDSTIKKKFQSRGHEKRKSFNSSKEHLNDATSVLGKVKEGTKSSRVPLATGKHTYHRKKLSRKELCSFQPVVEDNSGPGKQPLAKLRKHVSGDVKESAEVKITAIKSGKAKMIKGKKDTSSKSRSSVNVDNSSPSDQLSLKKTSPKVLKFACTVQNGVTDVVMSNGKKLSVSTDNSVGMKVVKRNNSDGTNPRKTNGHISLEKLSDGVTDVVKSNGKKLSVSTDNSVGMKVVKRNNSDGTIPRKTNGHISLEKLSATNKVSKSKRKHQADGVTSSHPSKVLKISNRGASLGASKQVTEARRNSAPKSLDLCPRSNGCARTSINGWEWRKWSQNASPASRARVRGLPRSQNKRIDSENNSSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRSRISDIRELQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVIAVEGQKKIFIYAKRHIKAGEEITYNYKFPLEDKKIPCNCGSKKCRGSMN* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 910 959 - -
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 776 792 - -
Tpr5g0602 1191 ProSiteProfiles Post-SET domain profile. 1175 1191 IPR003616 -
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 1003 1020 - -
Tpr5g0602 1191 ProSiteProfiles SET domain profile. 1052 1169 IPR001214 GO:0005515
Tpr5g0602 1191 Gene3D SET domain 943 1191 IPR046341 -
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 988 1020 - -
Tpr5g0602 1191 Pfam SET domain 1064 1168 IPR001214 GO:0005515
Tpr5g0602 1191 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 7 1191 - -
Tpr5g0602 1191 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 7 1191 IPR044570 GO:0042800|GO:0051568
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 119 141 - -
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 761 792 - -
Tpr5g0602 1191 SUPERFAMILY GYF domain 168 223 IPR035445 -
Tpr5g0602 1191 MobiDBLite consensus disorder prediction 925 954 - -
Tpr5g0602 1191 CDD SET_SETD1 1040 1187 - -
Tpr5g0602 1191 Gene3D - 32 109 IPR035445 -
Tpr5g0602 1191 Gene3D - 163 234 IPR035445 -
Tpr5g0602 1191 SMART set_7 1052 1175 IPR001214 GO:0005515
Tpr5g0602 1191 SUPERFAMILY SET domain 1048 1188 IPR046341 -
Tpr5g0602 1191 SMART PostSET_3 1175 1191 IPR003616 -
Tpr5g0602 1191 ProSiteProfiles GYF domain profile. 170 220 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0602 Tpr-Chr5 9280331 9297277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0602 1051 1191 C2H2 Transcription Factor Family AT2G23740 35.583 6.37e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr5g0602 SET 5.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0602 - - cam:101514300 1860.88