Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0594 ATGGCGCCCGGTGTAAGAAACTTACAGCTAACTACTCAATCCGCCCGCCGGAAAGTTGCTTCCACCGATGACATGGAAAACGTACGGGTACGACTACTAGACTCCGACGATGACGATGAGATGAGAAGAATTCAGATAAGAGTCTCCGGCATGACATGCACCGCTTGTTCAAATTCAATCGAATCAGCTCTTAAAGCCATTGACGGTGTTGTCACTGCTTCTGTTGCTTTACTGCAGAATAAAGCTGATGTTGTTTTCAACCCTGCTCTGGTTAAGGACGAAGACATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGATATATTACCTGAATCTAGTGGACAGGGAAAGATTCCACATGAAACCCTGGTTGGACAGTTCACTATTGGAGGTATGACATGTGCAGCTTGTGTAAATTCTGTTGAAGGTATTTTGAGAGATCTTCCGGGGGTTAAAAGGGCTGTGGTAGCTTTGGCCACTTCATTGGGAGAAGTTGAATATGATCCAAGTGTAATTAGTAAAGACGATATAGTCAATGCAATTGAAGATTCTGGCTTTGAAGCCTCTTTTGTACAGAGCAACGAGCAGGATAAAATTATTTACGGAGTTGTTGGCGTGTACAGTGTAACAGATGCACAGGTTTTAGAAGGCATGCTCAGTAACATGAAAGGAGTAAGGCAGTTTCGTTTTGACCAGATATCGGGTGAATTAGATGTTCTGTTTGATCCTCAAGTTCTCAGTCCTAGGTCCTTAGTTGATGGGATCCATGGGGAAAGCAATGGAAAGTTTAAGCTACGTGTTCGAAGCCCTTATACTAGGATGGTTTCTAAAGATGTTGAAGAGACCTCAACTATATTTCGGCTCTTTATCTCCAGCCTGTGTCTTAGTGTTCCTCTCTTCTTTATGAAGGTAGTTTGTCCTCATATTCCGTTTATGTATTCCTTGTTACTTTGGCGATGTGGGCCTTTTCTCATGGGTGATTGGGTGAAATGGGCATTGGTGAGTGTCATCCAATTTGGAATTGGGAAGCGTTTTTATATTGCAGCTGGCAGGGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGATTGCTGTGGGAACTACTGCCTCTTATGTTTATTCTGTTTATGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCCCCAACTTACTTTGAAACAAGTGCTATGCTTATAACATTTGTTTTGTTGGGGAAGTATTTGGAAGTCCTTGCCAAGGGAAAGACATCTGATGCCATAAAAAAATTAGTAGAACTTGCTCCTGCAACAGCTATATTGATCACTAATGATAAAGATGGTAAATCTATTGAAGAAAGGGAAATTGATTCTTTGCTCGTTCAACCGGGTGACACATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAAAGCATGGTAACTGGTGAGTCTGTACCTGTTTTGAAGGAGGTGAATGTTTCAGTTATTGGGGGTACAATAAATTTGCATGGTGTACTTCACATTAATGCTACCAAAATAGGATCTGATACAGTTTTGAGTCAGATAATAAGTTTGGTTGAAACAGCACAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTCCCGACTGTTATTTCTTTGGCATTATTGACATTTTTGAGTTGGTATATTGCTGGATCTATTGGAGCTTACCCAGACGAATGGCTTCCAGAAAATGGAACTCACTTTGTGTTTGCCCTAATGTTCTCAATATCTGTAGTGGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCGACGGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGAGTATTAATTAAAGGAGGAGATGCTTTGGAAAGGGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCAGTGTTACTACTGCTAAGGTATTCACTGAAATGCAACGTGGGGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACATCCTTTGGCAAAAGCAGTATTAGCATATGCACGCCACTTTCATTTCTTTGATGATTCTTCAGCTACTACAGAGAATGATGCAAAGTCTGGGTGGCTTTTTGATGTTTCAGATTTCTCTGCTCTTCCAGGAAGAGGTGTTCAATGCTCTATAGACGGACGACGTATTTTGGTTGGCAACAGGAATTTGATGGTGGAAAGTGGTATAGATATTTCAACAGAAGTGGAAAATTTTGTGGTTGAGCTGGAACAAACTGCACAGACAGGGATACTAGTATCATATGATGATATATTAATCGGAGTTTTGGGGGTTGCAGACCCATTAAAGAGAGAAGCATCTGTGGTTATAGAGGGCCTCCAGAAAATGGGAGTCACACCTGTTATGGTTACAGGAGATAACTGGCGAACAGCTCGTGCTGTTGCCAAGGAGGTTGGAATCCAAGATGTGAGAGCAGAGGTGATGCCTGCGGGAAAAGCCGAAATTGTTCGTTCATTCCAAAAGGACGGAAGCATAGTTGCAATGGTGGGCGATGGTATCAACGATTCTCCAGCATTAGCAGCTGCTGATGTTGGCATGGCAATTGGAGCTGGAACCGATGTTGCAATAGAAGCTGCTAACTTTGTTTTGATGAGAAATAACTTGGAAGATGTGATCACAGCAATCCATCTATCCCGGAAGACGTTCTCTCGTATTAGATTGAATTACATATTTGCAATGGGTTACAATGTTGTTGCTATACCAGTTGCTGCTGGAGTTTTATATCCTTCACTAGGGATCAAGCTGCCACCATGGGTTTCCGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCGTTGCTTCTTAAAAGATATAGAAGACCGAGACTTACCACAGTCCTTGAAATAATTGTAGAATAA 2967 0.4203 MAPGVRNLQLTTQSARRKVASTDDMENVRVRLLDSDDDDEMRRIQIRVSGMTCTACSNSIESALKAIDGVVTASVALLQNKADVVFNPALVKDEDIKNAIEDAGFEADILPESSGQGKIPHETLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALATSLGEVEYDPSVISKDDIVNAIEDSGFEASFVQSNEQDKIIYGVVGVYSVTDAQVLEGMLSNMKGVRQFRFDQISGELDVLFDPQVLSPRSLVDGIHGESNGKFKLRVRSPYTRMVSKDVEETSTIFRLFISSLCLSVPLFFMKVVCPHIPFMYSLLLWRCGPFLMGDWVKWALVSVIQFGIGKRFYIAAGRALRNGSTNMDVLIAVGTTASYVYSVYALLYGALTGFWSPTYFETSAMLITFVLLGKYLEVLAKGKTSDAIKKLVELAPATAILITNDKDGKSIEEREIDSLLVQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVLKEVNVSVIGGTINLHGVLHINATKIGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVISLALLTFLSWYIAGSIGAYPDEWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTAKVFTEMQRGEFLTLVASAEASSEHPLAKAVLAYARHFHFFDDSSATTENDAKSGWLFDVSDFSALPGRGVQCSIDGRRILVGNRNLMVESGIDISTEVENFVVELEQTAQTGILVSYDDILIGVLGVADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKAEIVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANFVLMRNNLEDVITAIHLSRKTFSRIRLNYIFAMGYNVVAIPVAAGVLYPSLGIKLPPWVSGACMALSSVSVVCSSLLLKRYRRPRLTTVLEIIVE* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0594 988 Gene3D - 41 112 - -
Tpr5g0594 988 ProSiteProfiles Heavy-metal-associated domain profile. 199 256 IPR006121 GO:0046872
Tpr5g0594 988 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Tpr5g0594 988 SUPERFAMILY HMA, heavy metal-associated domain 39 111 IPR036163 GO:0046872
Tpr5g0594 988 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 400 675 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0594 988 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 734 942 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0594 988 Pfam E1-E2 ATPase 428 626 - -
Tpr5g0594 988 SUPERFAMILY Calcium ATPase, transmembrane domain M 385 937 IPR023298 -
Tpr5g0594 988 Pfam haloacid dehalogenase-like hydrolase 643 876 - -
Tpr5g0594 988 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Tpr5g0594 988 SUPERFAMILY HAD-like 646 968 IPR036412 -
Tpr5g0594 988 TIGRFAM TIGR00003: copper ion binding protein 44 107 IPR006122 GO:0005507
Tpr5g0594 988 TIGRFAM TIGR00003: copper ion binding protein 127 189 IPR006122 GO:0005507
Tpr5g0594 988 Gene3D - 658 795 IPR023299 GO:0000166
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 483 497 - -
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 647 661 - -
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 787 798 - -
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 809 819 - -
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Tpr5g0594 988 PRINTS P-type cation-transporting ATPase superfamily signature 885 897 - -
Tpr5g0594 988 PRINTS H+-transporting ATPase (proton pump) signature 834 850 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0594 988 PRINTS H+-transporting ATPase (proton pump) signature 862 878 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0594 988 PRINTS H+-transporting ATPase (proton pump) signature 893 918 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0594 988 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872
Tpr5g0594 988 PANTHER HEAVY METAL P-TYPE ATPASE 21 981 - -
Tpr5g0594 988 ProSitePatterns Heavy-metal-associated domain. 48 78 IPR017969 GO:0046872
Tpr5g0594 988 CDD HMA 45 107 IPR006121 GO:0046872
Tpr5g0594 988 Pfam Heavy-metal-associated domain 46 106 IPR006121 GO:0046872
Tpr5g0594 988 Pfam Heavy-metal-associated domain 128 188 IPR006121 GO:0046872
Tpr5g0594 988 Gene3D - 126 191 - -
Tpr5g0594 988 SUPERFAMILY HMA, heavy metal-associated domain 123 196 IPR036163 GO:0046872
Tpr5g0594 988 Gene3D - 638 912 IPR023214 -
Tpr5g0594 988 CDD P-type_ATPase_Cu-like 288 958 - -
Tpr5g0594 988 SFLD C1.7: P-type atpase like 629 914 - -
Tpr5g0594 988 SUPERFAMILY Calcium ATPase, transduction domain A 447 533 IPR008250 -
Tpr5g0594 988 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 361 971 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tpr5g0594 988 SFLD p-type atpase 629 914 IPR044492 -
Tpr5g0594 988 Gene3D - 415 537 - -
Tpr5g0594 988 CDD HMA 127 190 IPR006121 GO:0046872
Tpr5g0594 988 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Tpr5g0594 988 PANTHER ATP7, ISOFORM B 21 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0594 Tpr-Chr5 9178405 9185218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0594 1 988 Primary Pumps ATPases AT5G44790 72.962 0.0 1491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0594 K17686 - gmx:100804960 1662.12