Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0574 ATGGCTCATTTTCAGATGTGTCCACCTGAGCCACAACCTAAGAAGACTACACCAAAACCTACAAAAAAAAGAAAACGTAAAGAAACCTGTATTAATGAAGACTATGATATTTGTGATACCAAAGAATCCGAGGAAAATTCGTCATCATTCTTAAGTGTTGCGAAAAGTGCTATGCGCGAACTATTGAGGCTCGTGTCTACTACTGAAGAATCATTATGGACACGCCATTTAAACAAAGTAGTTGGATTTACTCTTGATCGACAAATGTATGTCAATTTGAATTCAACGTTTTCAAAATTGATATCTCCAAATAGACGTGAAGAGTCTTCGAAAGAAGAGCTGATAGTTCGGAGCAGCGGAAAAAATTTGGTTGAATTGATTTTAGATTCGGAAGAATGGGCTAAATTATTTCCAACAATTGTTTCAAATGCTAAAACAGTGAAAGTATTTAATGCCGGTTCACCAGAAAATCGAAATGGAGCCTTACAAGCTATGGTTGGAGAAGTGCACATCCTTTCACCTTTGGTACCATCTCGAGAGTTCTACTTCATCCGTTATTGTCGACAGTTTAGCAATAATGATTGGGTGATAGTTGACGTGTCAGGTGATTTCCTATTCGACCGCGCTAATATTCGCAATCCGGCTTACAAACTTCCATCTGGGTGTTTGATTCGTGAAATGCCTAACGGAAAATCTAAGGTTACTTGGGTTGAGCATGTGATGGTGAATGAAATGAGTCAACAACACATGCTTTACAAAGATCTCATTCAAGAGTATAATCCATTTGGAGCAAAAATATGGCTTTATGCACTTCAAAGAATGTGCGAGAAAAATCATTGTTCTTCAATTGAGTACACACCCAAACATGACAATGATAGAGAGATTAGGTCAAAAGAAGGGAGAAAAAGTGTGATGGACCTATCTAATCGAATGATTCGAAGCTTTTGCAAAGATTTGAATAGGGCAAACATGAACCATATTTTGACACATCACACAAATGAATATAAGATTCATTTAACTCAAGAGATTTATAACCCTAACAAGTTTCGTTTGAAATGTCGCTCCAATGCAAATGGCATCGTTGTCACTGCAATTGGATCTGTTAGGCTTCATTTTGCTCCGCAGACTGTTTTCCACTTTCTTAGTGATGAAAGAAGACGACAAGAGTGGGATAGTCTTGTTGGTGAAAGAGAAATGCATGAAGTTGCCTACATCTCAATAGGAGAAATTCAATCTTACAACCGCATTTCCATTCTTGAGATATATGATGATGATAACGACGACGACAATGACGATGACGATGGTGATGATGATGATGATGAGAAGGACGACGATAACAAAAACAACAACAAAAATGTGCAAATTTTTCAAGAAGTTTGTATTGATCCTGTGGGAGCATATGTTGTGTATGCTCCAATCAATACAAGACATATGCATAGGATCTTAAATGAGGAGAACTCATCAGATTTGCAAATTCTTCCTTGGGGTTTCATGATCTCAAAAGTTGGACATTTTGATGCTGATGATACATTATTAACATTTTCTTTCAAAGTTTTAGTTTCTGCTGAAGCATCATTAGGAGTAACCATTGAAAGGTTAACTTCAATATTCACAACAACAATCGAAAAGATTCAGCATGCATTAGATTATGAAGATGATGATTAA 1665 0.367 MAHFQMCPPEPQPKKTTPKPTKKRKRKETCINEDYDICDTKESEENSSSFLSVAKSAMRELLRLVSTTEESLWTRHLNKVVGFTLDRQMYVNLNSTFSKLISPNRREESSKEELIVRSSGKNLVELILDSEEWAKLFPTIVSNAKTVKVFNAGSPENRNGALQAMVGEVHILSPLVPSREFYFIRYCRQFSNNDWVIVDVSGDFLFDRANIRNPAYKLPSGCLIREMPNGKSKVTWVEHVMVNEMSQQHMLYKDLIQEYNPFGAKIWLYALQRMCEKNHCSSIEYTPKHDNDREIRSKEGRKSVMDLSNRMIRSFCKDLNRANMNHILTHHTNEYKIHLTQEIYNPNKFRLKCRSNANGIVVTAIGSVRLHFAPQTVFHFLSDERRRQEWDSLVGEREMHEVAYISIGEIQSYNRISILEIYDDDNDDDNDDDDGDDDDDEKDDDNKNNNKNVQIFQEVCIDPVGAYVVYAPINTRHMHRILNEENSSDLQILPWGFMISKVGHFDADDTLLTFSFKVLVSAEASLGVTIERLTSIFTTTIEKIQHALDYEDDD* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0574 554 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 549 IPR042160 -
Tpr5g0574 554 Gene3D - 50 267 IPR023393 -
Tpr5g0574 554 SMART START_1 63 277 IPR002913 GO:0008289
Tpr5g0574 554 CDD START_ArGLABRA2_like 48 276 - -
Tpr5g0574 554 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 19 549 - -
Tpr5g0574 554 SUPERFAMILY Bet v1-like 48 277 - -
Tpr5g0574 554 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g0574 554 MobiDBLite consensus disorder prediction 424 449 - -
Tpr5g0574 554 Pfam START domain 110 277 IPR002913 GO:0008289
Tpr5g0574 554 ProSiteProfiles START domain profile. 43 280 IPR002913 GO:0008289
Tpr5g0574 554 MobiDBLite consensus disorder prediction 424 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0574 Tpr-Chr5 8839340 8842350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0574 43 548 Homeobox Transcription Factor Family AT4G04890 33.708 1.36e-83 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0574 K09338 - aprc:113852280 335.88