Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0560 ATGTCCAATTCTTACCTCCAATTGTTGCTTCTGTTGGTTCTTTACATAATTTCAGCTAATTCAGCTCAACCTTATGAGGGAAACTATGGTGAAGCTGTGTTCACTCTACAAGTCCCAACATTAGAGGAAAACAACTTGGATAATCTCTTATCCTTTGGTTACTACCATAAAAGTTGTCCTCAATTTGAGTCCATTTTGCATAACAAAGTCAAAGAATGGATTAAGAAGGATGACACTTTAGCAGCTAGTCTCCTAAGGTTGCATTTCCATGATTGCTCTGTTAGGGGATGTGATGGCTCCATTCTATTGAAACATGAAGGAAGTGAAAGGGCAGCACAAGCAAGCAAGACATTAAGAGGTTTTGAAGTTATTGATGATATAAAGGCAGAGTTAGAGAAACATTGTCCTAAGAAAGTGTCTTGTGCTGACATTCTAACAACTGCTGCAAGGGATGCCACAGTTGAAGTGGGTGGACCATATTGGACAGTCCCTTATGGTAGGAAAGATGGGACAATCTCTTTTGACTATGAAGCTGAAATGATTCCTAAGGGTCATGAGAACATTACTTCGTTGGTTGAGTTTTTCCAATCCAAAGGCTTGACTGTTCTTGACTTGGTTGTTCTCTCAGGGGCACATACTATTGGAAGGACTACATGTGGCTCAATTCAATACAGACTATACAACTACAAAGGAACAGGCAAACCAGACCCATCAATTGATCCAAAATACTTAAACTTTTTGCAAAGGAAATGTAGATGGGCCTCAGAATATGTTGATCTTGATGGAACAACACCAAAAACCTTTGATAGAATGTACTATTTAAATCTCAAAAAGAACATGGGTTTGTTATCAACAGATCAATTGTTACAATCTGATCCAAGAACTTCTCCATTGGTTTCAGCATTGACTACATCACCATCAGTTTTTGAACATCAATTTTCTGCTTCAATGTCAAAATTTGGTGTCATTGATGTTCTTACTGACGAGGATGAAGGAGAAATCAGGACCAATTGCAATTTTGTTAATGCTTATTGA 1035 0.3797 MSNSYLQLLLLLVLYIISANSAQPYEGNYGEAVFTLQVPTLEENNLDNLLSFGYYHKSCPQFESILHNKVKEWIKKDDTLAASLLRLHFHDCSVRGCDGSILLKHEGSERAAQASKTLRGFEVIDDIKAELEKHCPKKVSCADILTTAARDATVEVGGPYWTVPYGRKDGTISFDYEAEMIPKGHENITSLVEFFQSKGLTVLDLVVLSGAHTIGRTTCGSIQYRLYNYKGTGKPDPSIDPKYLNFLQRKCRWASEYVDLDGTTPKTFDRMYYLNLKKNMGLLSTDQLLQSDPRTSPLVSALTTSPSVFEHQFSASMSKFGVIDVLTDEDEGEIRTNCNFVNAY* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0560 344 Gene3D - 53 342 - -
Tpr5g0560 344 PANTHER PEROXIDASE 25-RELATED 43 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 Gene3D Peroxidase, domain 2 182 320 - -
Tpr5g0560 344 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 ProSiteProfiles Plant heme peroxidase family profile. 49 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 CDD secretory_peroxidase 50 341 IPR033905 GO:0004601|GO:0042744
Tpr5g0560 344 PANTHER PEROXIDASE 43 341 - -
Tpr5g0560 344 Pfam Peroxidase 68 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0560 344 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
Tpr5g0560 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Tpr5g0560 344 SUPERFAMILY Heme-dependent peroxidases 50 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0560 Tpr-Chr5 8524418 8527033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0560 46 343 Peroxidase AT1G30870 60.000 2.34e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0560 K00430 - gmx:100527587 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0560 5 8524418 8527033 Tpr5g0560 5 8524418 8527033 ECH