Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0559 ATGGCATCAACAATGAAAATATTAACACTTTTTCTCTTATGCTTCTTCTCTTCTATTCTATCAGTCTTTTGTAATGAAAATCAAATAAGCACTTTGAAAGTGCTTTTAGAAGTGAAATCTTCTTTTGTGAATGACCCTGAAAATGTTCTCATTGATTGGTCACAAAACAACACTGATTATTGTACTTGGAAAGGCATTTCATGTGACTCGGTGAATGTTGTGGTTGGACTCAACTTGTCCTACTCGTCACTCACTGGGTCAATTTCACCATCAATTGGTCTTTTACAAAACCTGCTCCACCTTGATCTTTCTTCTAACCATATTGGGGGTCCCATTCCACCTTCTATTTCTAACCTCACTAAATTAGAATCTTTGCTTCTCTTTTCCAACCAACTCACAAACCACATTCCACACGAGTTAGGCTCGTTACTGAGTCTCCGTGTTTTACGACTCGGTGACAATGAACTCAGTGGCGAAATTCCTTCTTCTTTAGGCAATTTGGTCAACCTTGTCAGCCTTGGTTTAGCTTCATGCAATCTCACCGGTTCAATTCCGAGTCAACTCGGTCAACTCACGATGTTACAGAATTTGATCCTGCAATATAACGAGTTAACAGGTCCGATTCCGGCCGAGTTAGGAAACTGTTCAAGCCTTGTAATCTTCACTGCAGCTGACAACAAACTCAATGGAACAATCCCAACTCAACTGAGTCAACTCATAAACCTCCAAGTTCTCAACTTTGCCAACAACACCTTAACAGGGGAAATTCCGAGTCAACTCGGTCAAATGAATGAACTTAATTATCTCAATTTAATGGAAAACAAACTTGTGGGTCACATTCCTTCATCATTATCTCAATTGGGTAACCTTCAAAATCTTGACTTGTCAATGAACAGATTCAGTGGTGGAATTCCAAAAGAATTTACAAACATGCATCAGTTGAAATACTTAGTTCTTTCTGGTAACCCTTTACATGGAACAATTCCACCAACTTTATGTTCCAATGCAACAAATTTGGAACATTTAATGATATCTACGAGTGAACTTTATGGTGAAATTCCATCTGAATTGAGTCAATGTAAATCATTGAAGCAAATAGTTTTATCAAACAATTCTCTCAATGGAACAATACCACTTGAGATTTATAGTTTGGTGAATTTAACTGATCTTATGCTTCATAACAATAGTTTAATTGGTTCAATTTCACCTAACATAGGTAATTTAACCAACATGCAAACACTTGCATTGTTTCATAATAAGTTACAAGGTGTTTTGCCTAAAGAAATTGGAAGGCTTGGAAAGTTGGAAATTTTGTATCTTTATGATAATCAATTTTCTGGTGAGATACCTTGGGAAATTGGTAATTGTTCAAGATTACAAATGGTTGATTTTTTTGATAACAATTTTGGTGGAAGAATTCCAATTAGTATTGGAAGGTTGAAAGATTTGAATTTTCTTCATCTTAGGCGAAATGAGTTTGTTGGTGAAATTCCATCTACACTTGGGAACTGTCATAAGCTGAATGTTCTTGATTTGGGAGATAATAATCTCTCGGGTGGAATTCCTGCAACATTTGGTTATCTTAAAGATTTGAAGCAGTTTATGCTTTATAATAATTTTCTTGAAGGTGGTATTCCTCGACAAATGGCGAATGTTGCAAACTTGACAAGAGTTAATCTTTCGAAGAATAAGTTGAATGGAAGTTTGGTTCCATTGTGTAGCTCTAGAGAGTTTCTTTCTTTTGATGTTACAGGTAATGAATTTGATGGTGAAATTCCTTCAAATTTGGGAAACTCTTTGTCTCTTGAGAGGTTAAGATTAGGAGGTAACAAATTTTCTGGTGAAATTCCGAGGACATTTGGAAAAATCGCTGATTTGTCATTGTTAGATCTTTCGGGAAATTCGCTCATTGGACCAATACCAGGTGAATTATCTTTGTGTGGTAAACTAACTTCTGTTGATTTAAGCAATAATCTTCTTTTTGGTCATATACCATCATGGCTTGGAAATTTACCTAAGTTAGGAAAACTTAATCTTGCTTATAATCAATTTTCTGGTCCTTTTCCACTGAGATTATTCAAATTACCTATGTTGTTGATTCTTTCCTTGAATAACAATTCTCTTAATGGTAGTTTACCAAATGGTATCGGCGATCTTGAATCGCTTAATGTCCTAAGACTTGACCATAATAATTTTAGTGGACCAATCCCTCATGCAATAGGTAAGTTGAGAAATCTTTATGAGCTGAATCTCTCTAGAAATGTTTTCAGTGGTGACATACCGAATGAGATCGGAAATCTTCAAAATCTTCAGGTTGTTTTAGACCTCAGTTACAATAATCTCTCTGGTCAGGTTCCATTTTCTATTGGTACATTGGCGAAATTGGAAGCACTTGATCTATCCCACAATCAACTCGCCGGTGTAGTTCCTCCAAACATTGGCGAAATGATTAGCTTGGAAAAGTTCAATATCTCTTATAATAGCTTACAAGGTACACTGGATAAGAAGTTTTCTCGCTGGCCATACGATGCGTTTGTAGGTAACCTTCGTCTTTGTGGAGCCTCTCTCGGTAGCTGCCACCGCAGTGGAGCTTCCCGAAATAAGCTATCACGATTAAGTGAGACATCAGTTGTCGTAATCTCTGCCATTTCAACTCTAGCTGCAATTGCACTGCTTATTCTTGCAGTAAAAATCTACTTGAGAAATAAACGAGATTTTCTGAACAAAGACAGCGAATTGGCCTGTGTTTTCTCCTCTTCTTCGTCAAAAGCGCAGAAACGGCCATTGTTCCCTTTAAGTACAGGTGGACGGCGAGAATTCAGGTGGGAAGACATCATGGAAGCTACAAACAATTTGAGTGATGAATTCATAATCGGTTCCGGAGGTTCAGGCACAGTCTACAGAGTTGAATTGCCTACCGGCGAAACCGTAGCTGCCAAGAAAATTTCATTGAAAGATGAATATTTGTTACATAAAAGCTTTCTAAGAGAAGTGAAGACATTAGGGAGAATTAAGCATAGACATTTGGTGAAACTGGTCGGTTGTTGTAGCAATCGAAACAAAGGAAATGGTTGTAACTTACTGATATATGAGTATATGGAAAATGGAAGTGTTTGGGATTGGTTACATGGAAATGCTCTAAAGTTAAAGAAAAACCTTGATTGGGAAACAAGGTTCAAAATTGCTTTAGGGTTAGCTCAAGGAATGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCATAGGGACATCAAATCTAGCAACATATTGTTAGATTCTAATATGGATGCACATTTGGGAGATTTTGGATTGGCAAAAGCTATCATTGAGAATCATGATTCTAATACTGAGTCTACTTCTTGCTTTGCAGGATCTTATGGTTACATTGCTCCAGAATTTGGATATTCTCTAAAGTCAACAGAGAAAAGTGATGTTTACAGCATGGGAATTGTGCTTATGGAACTTGTTAGTGGTAAATTACCAACTGATGCATTATTTAGAGGAGGTATAGACATTGTAAGATGGGTGCAGATGCACATTGACATGAAAGGAACTGAAAAAAATGAAGAACTTATAGATCCTGAGCTTAAACCACTTTTACCTTGTGAAGAATTTGCTGCATTTCAAGTTCTTGAGATAGCTTTACAATGCACAAAAACTTTACCACAAGAGAGGCCATCATCAAGACAAGTTTGTGATCTTCTTCTACATGTGTCCAAGAACAAAAAAGTGGAGTTTAAGAAAATGAATTTGGATTCCTACAACTGA 3771 0.3678 MASTMKILTLFLLCFFSSILSVFCNENQISTLKVLLEVKSSFVNDPENVLIDWSQNNTDYCTWKGISCDSVNVVVGLNLSYSSLTGSISPSIGLLQNLLHLDLSSNHIGGPIPPSISNLTKLESLLLFSNQLTNHIPHELGSLLSLRVLRLGDNELSGEIPSSLGNLVNLVSLGLASCNLTGSIPSQLGQLTMLQNLILQYNELTGPIPAELGNCSSLVIFTAADNKLNGTIPTQLSQLINLQVLNFANNTLTGEIPSQLGQMNELNYLNLMENKLVGHIPSSLSQLGNLQNLDLSMNRFSGGIPKEFTNMHQLKYLVLSGNPLHGTIPPTLCSNATNLEHLMISTSELYGEIPSELSQCKSLKQIVLSNNSLNGTIPLEIYSLVNLTDLMLHNNSLIGSISPNIGNLTNMQTLALFHNKLQGVLPKEIGRLGKLEILYLYDNQFSGEIPWEIGNCSRLQMVDFFDNNFGGRIPISIGRLKDLNFLHLRRNEFVGEIPSTLGNCHKLNVLDLGDNNLSGGIPATFGYLKDLKQFMLYNNFLEGGIPRQMANVANLTRVNLSKNKLNGSLVPLCSSREFLSFDVTGNEFDGEIPSNLGNSLSLERLRLGGNKFSGEIPRTFGKIADLSLLDLSGNSLIGPIPGELSLCGKLTSVDLSNNLLFGHIPSWLGNLPKLGKLNLAYNQFSGPFPLRLFKLPMLLILSLNNNSLNGSLPNGIGDLESLNVLRLDHNNFSGPIPHAIGKLRNLYELNLSRNVFSGDIPNEIGNLQNLQVVLDLSYNNLSGQVPFSIGTLAKLEALDLSHNQLAGVVPPNIGEMISLEKFNISYNSLQGTLDKKFSRWPYDAFVGNLRLCGASLGSCHRSGASRNKLSRLSETSVVVISAISTLAAIALLILAVKIYLRNKRDFLNKDSELACVFSSSSSKAQKRPLFPLSTGGRREFRWEDIMEATNNLSDEFIIGSGGSGTVYRVELPTGETVAAKKISLKDEYLLHKSFLREVKTLGRIKHRHLVKLVGCCSNRNKGNGCNLLIYEYMENGSVWDWLHGNALKLKKNLDWETRFKIALGLAQGMEYLHHDCVPKIIHRDIKSSNILLDSNMDAHLGDFGLAKAIIENHDSNTESTSCFAGSYGYIAPEFGYSLKSTEKSDVYSMGIVLMELVSGKLPTDALFRGGIDIVRWVQMHIDMKGTEKNEELIDPELKPLLPCEEFAAFQVLEIALQCTKTLPQERPSSRQVCDLLLHVSKNKKVEFKKMNLDSYN* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0559 1256 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 1252 - -
Tpr5g0559 1256 Gene3D Transferase(Phosphotransferase) domain 1 1033 1255 - -
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 573 867 IPR032675 -
Tpr5g0559 1256 SUPERFAMILY L domain-like 574 841 - -
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 381 461 IPR032675 -
Tpr5g0559 1256 SUPERFAMILY L domain-like 280 617 - -
Tpr5g0559 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Tpr5g0559 1256 SUPERFAMILY Protein kinase-like (PK-like) 929 1236 IPR011009 -
Tpr5g0559 1256 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 1 1252 - -
Tpr5g0559 1256 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Tpr5g0559 1256 Pfam Leucine rich repeat 744 805 IPR001611 GO:0005515
Tpr5g0559 1256 ProSiteProfiles Protein kinase domain profile. 952 1241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0559 1256 Pfam Leucine Rich Repeat 97 119 IPR001611 GO:0005515
Tpr5g0559 1256 Gene3D Phosphorylase Kinase; domain 1 914 1032 - -
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 180 277 IPR032675 -
Tpr5g0559 1256 SUPERFAMILY L domain-like 31 329 - -
Tpr5g0559 1256 SMART serkin_6 952 1241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 278 380 IPR032675 -
Tpr5g0559 1256 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 30 179 IPR032675 -
Tpr5g0559 1256 Gene3D Ribonuclease Inhibitor 466 572 IPR032675 -
Tpr5g0559 1256 ProSitePatterns Protein kinases ATP-binding region signature. 958 981 IPR017441 GO:0005524
Tpr5g0559 1256 SMART LRR_typ_2 792 816 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 695 719 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 143 167 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 432 456 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 119 142 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 191 215 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 95 118 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 311 335 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 287 310 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 480 504 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 384 408 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 743 767 IPR003591 -
Tpr5g0559 1256 SMART LRR_typ_2 239 263 IPR003591 -
Tpr5g0559 1256 Pfam Protein kinase domain 957 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0559 Tpr-Chr5 8505018 8510423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0559 34 596 Receptor kinase-like Gene Family AT5G56040 36.478 1.27e-97 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g0559 Pkinase 9.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0559 - - gmx:100801889 1718.75