Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0547 ATGGCTCCGAGCAAAAGCCTCCTCATCGACGATCCACCCAGCGCCACCGCCTCCGCCACCTCCTCCGAGTCTTCCGACGACGAGAAAAATTATTATATCCAGCTGCCTTGTTCATCTCAAAAACAACCAGCAGTGGTCGAAGGAGAAGAAGAAATAGGAGATGAAGATTCTTCATCAGAAGAAGAAGATGATTCTTCATCTGAACAAGAACTTCAACATTCTCAACCTGCATCCCAAAATCCTCCACCTTCTACCTCAATCTCTAACCCTAAACCTGTTGCTTCTGCTGAATCCGAATCCGAAGAAGAAGATTCTTCATCTGAAGAACTTCAACATTCTCAACCTGCTGCTTCCCAAAACCCTACACCTTCTACCCCAAATTCAAACCCTAACCCTAAATCTGTTGCTTCTGCTGAATCCGAATCCGAATCCGGATCCGATTCTGCGGATTCCGAACCGAAACCCACTACACCTCATGACACTAAACTCAAACAACAACACGCTTCCAAGCCCATCAAAACCCAACCACAGGCCCAATCATCAGCTCAAGCCCAAACCACTCCTAAATCTGGGAACAAACGTGCTAACGACGACAACAACGCCAATGGAAATGCTGCAAAACGTTCCAAAGGCAAAGAAACTGTTTCTGCCGCTGCTGGTGGTAGAATCTTCAGTGAAGGCGATGAACTCGCTATTCTGAGAGGAGTTGCTGACTTCCTTTCCAAAACTGGAAAGGATCCTTCGAAGAATATAGATTCTTTTCATGATTTTGTGAAGAACTCGCTTGGTGCTACGGTGACTAATGAGCAACTTAAGCGAAAAATTCGTGGTCTAAGGGAGAAATATGAATCATGTGATAATTTCATTAAACCCCATGACAAGAAAGCTTTAGAACTCTTCAAAAAGATTAAATGGGGAAACAATGGTGGGAATGTTGCTGGAGAAGAAAATGGAAAAGCTGTTGATGTGAAAAGTCCAAAGAAAGATGTTAATGTTAAAGTTAAGCACATTGGTTCTTCTTCTAGAAATGTGGAAAGTGTTTCTGATAATAATGTCATTTTGAAAGAAATTTGTCGTTTTGGTGTTGATATGGGTTTGTCTGCTTTGAACAAGGATGCTGTGAAACAGGGATTGGAAATGATTGCTGAAAGCAGTAGGGCTGAAATGGAGCGCCAATGGAGGCGCCTTCATGTCACCGAATTGGAGGTTTTAATGAATCTGGCGCAGTTTGTGAAAGAGCTTTCTAGGGAAATATTGGAGGAACTCAAGAAATCAATCCATTAG 1284 0.4291 MAPSKSLLIDDPPSATASATSSESSDDEKNYYIQLPCSSQKQPAVVEGEEEIGDEDSSSEEEDDSSSEQELQHSQPASQNPPPSTSISNPKPVASAESESEEEDSSSEELQHSQPAASQNPTPSTPNSNPNPKSVASAESESESGSDSADSEPKPTTPHDTKLKQQHASKPIKTQPQAQSSAQAQTTPKSGNKRANDDNNANGNAAKRSKGKETVSAAAGGRIFSEGDELAILRGVADFLSKTGKDPSKNIDSFHDFVKNSLGATVTNEQLKRKIRGLREKYESCDNFIKPHDKKALELFKKIKWGNNGGNVAGEENGKAVDVKSPKKDVNVKVKHIGSSSRNVESVSDNNVILKEICRFGVDMGLSALNKDAVKQGLEMIAESSRAEMERQWRRLHVTELEVLMNLAQFVKELSREILEELKKSIH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0547 427 PANTHER STOREKEEPER PROTEIN 86 424 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 153 167 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 49 67 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 1 217 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 11 41 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 110 152 - -
Tpr5g0547 427 MobiDBLite consensus disorder prediction 168 209 - -
Tpr5g0547 427 Pfam Protein of unknown function, DUF573 222 303 IPR007592 GO:0006355
Tpr5g0547 427 PANTHER BNAANNG10740D PROTEIN-RELATED 86 424 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0547 Tpr-Chr5 8165882 8167494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0547 140 420 GeBP Transcription Factor Family AT1G61730 30.132 3.26e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g0547 DUF573 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0547 - - mtr:MTR_2g010790 221.09