Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0543 ATGGCTCCTCCATGGGTTCAAGAACTTCATCTCAATCCCTTAACTATTCCGATCACTATCGTAAACACATTCTCCGTCACTCCATCAAAACTTATTCCTGTTAAACCAGGAGATAGTTTATATCTTTCAAATCTCGATGACATGATTGGCGCGCGCGTGTTTACACCAACCGTGTACTTTTATCAATCAGACAAGTCTAGTACTTGTTTCCAAAAACCGGTCACGGAAATACTTCGCCTTGCTCTCGCGGATGTTTTAGTTCCTTATTACCCTCTCTCAGGAAGGTTAAGAGAAACCAAAACCGGTAAATTGGAAGTGTTTTTCGGAGAAAAAGAAGAAGAAAAAGGTGCGTTAATGGTCGAAGCAAGATCAAACATTGCATTATCTGAATTAGGTGATTTTGCAGCTCCAAACCCATCTTGGGAACCATTGATTTTCAAATTCCCAAATGAAGAACAATACAAAGTCTTAGAAATGCCACTTGTTATAGCTCAAGTTACAATCTTCGCGTGTGGTGGATTTAGCCTCGGTTTACGCCTTTGTCATTGTATATGTGATGGAATGGGAGCAATGCAGTTTCTAGGAGCATGGGCTGCAACAGCGAAAACCGGAACATTGGTAACCGAACCTAAACCTTGTTGGAACAGAGAAATTTTCAAGCCACGCGATCCGCCTCAAGTTAAATTTCCACACATGGAGTTCATGAGAATCGATGAAAGATCGAATTTAACAATGAAACTATGGAAAACAAAGCCGGTTCAAAAATGTTATAGAATAAAACGCGAGTTTCAAAACCAATTGAAATCGCTCGCACAACCATTAGACGCTGCCGGTTGTACTACCTTCGATGCAATTGCAGCACATGTTTGGAGATCATGGGTTAAAGCACTAGATGTGAAGCCGCAAGATTACGAATTAAGGTTAACGTTTTCGGTTAATGCTAGACAGAAACTTAAAAATCCACCATTAAAAGAAGGGTTTTACGGTAACGTGGTTTGTGTTGCTTGTACAACAAGTAAAGTTTCCGAGCTTGTGAACGGTAAATTACCAGAAACAACACTATTAGTTCGCGAAGCGAGACAGAATGTAACCGAGGAATATTTGAGATCAACCGTTGATTATATCGAGGTTGATCGGCCAAAACAACTTGAGTTTGGTGGTAAACTTACAATAACACAATGGACAAGATTTTCAATTTATAAATGTGCTGATTTTGGATGGGGTAAACCAATTTATGCTGGTCCTATTGATTTAACACCAACACCTCAAGTTTGTGTTTTTTTACCTGAAGGTGAAGAAATTGATTGTAGTCATGGTTCTATGATTGTTTGCATTTGTTTACCTCAATCTGCTGCTGACAAGTTTACACAAGCATTGTTGATTGATTCAATGTAG 1395 0.3928 MAPPWVQELHLNPLTIPITIVNTFSVTPSKLIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQSDKSSTCFQKPVTEILRLALADVLVPYYPLSGRLRETKTGKLEVFFGEKEEEKGALMVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTIFACGGFSLGLRLCHCICDGMGAMQFLGAWAATAKTGTLVTEPKPCWNREIFKPRDPPQVKFPHMEFMRIDERSNLTMKLWKTKPVQKCYRIKREFQNQLKSLAQPLDAAGCTTFDAIAAHVWRSWVKALDVKPQDYELRLTFSVNARQKLKNPPLKEGFYGNVVCVACTTSKVSELVNGKLPETTLLVREARQNVTEEYLRSTVDYIEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGKPIYAGPIDLTPTPQVCVFLPEGEEIDCSHGSMIVCICLPQSAADKFTQALLIDSM* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0543 464 Pfam Transferase family 17 457 - -
Tpr5g0543 464 Gene3D - 15 236 IPR023213 -
Tpr5g0543 464 PANTHER F21B7.2 12 460 - -
Tpr5g0543 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 460 - -
Tpr5g0543 464 Gene3D - 238 459 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0543 Tpr-Chr5 8045630 8047066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0543 18 462 Monolignol Biosynthesis Gene Families AT5G48930 30.702 1.19e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0543 K15400 - gmx:100802814 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0543 5 8045630 8047066 Tpr5g0543 5 8045630 8047066 ECH