Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0534 ATGTTTACATCTGACGAGCATATGTCAGATGAAGCATTGTTGAGAGCAATCAATGATATTGATGCGAAGTTTTCTGAGGAAGCCTCTAGAAATAACCTTCATTCAGGATCTACAGCAACAATTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCTTTCATTTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGCCTCTTTATTAAAGCTGTATAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGAATCGTGAAAAGTACAGATTAGCATCTTCCAATGGGTTCACTCATTTTGCAGTGAAGGAATTGACTAGCGATCATCATCCAGACAGAGAGGATGAAAAAACTCGGGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGTGGTGTACCTCGCGTAAATGGTCAGTTAGCTATTACACGGGCTATTGGTGATGTGTTCTTTAAAAGTTATGGAGTTATATCTGTACCAGAAGTGACTGATTGGCAACCTCTAACTGCAAATGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTTAGTGACATGAGATCAGAGTGCACCTCTTCATCTTCCTATTCATTAGCGGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTGCTAAATCTTCTGCGAACTCACTTAGAAGAAGCTATACTGAAAATGAGGATGCAGGCTTCCCATCATTTGGGCTGCAGGAATCAGCTTACAGAAGCTCAGCTAATGATATCACCTCTGATCTATTGCACCTGGAGCACCCTCATTTGCTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGATTCAGTGGATTCTAAGTGGCCTCCCAAAAAAGATGACCGGGAAGACTATTTGTATGAACTACCCCAGCCTCTACCAGATGCCCTTCACCAACAAGCTGCAGTAGATGGCCCTGTAATTTTGTACAATGACCAAAACTTTTGCTTTCACCTGAGTTCAACTATCAATCAAGCCAAAGACCAATGCATAAACCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTAATTGATGCTGGTTCAGATAATGAGTCTTCTGATTATTCGATGCCTGATTCAAGGTAA 1275 0.4055 MFTSDEHMSDEALLRAINDIDAKFSEEASRNNLHSGSTATIVLVADDKILVANIGDSKAFICSENFQSPKEAKASLLKLYRQTERDGSVSVWNREKYRLASSNGFTHFAVKELTSDHHPDREDEKTRVEAAGGQVLNWGGVPRVNGQLAITRAIGDVFFKSYGVISVPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHRFSDMRSECTSSSSYSLADFIINTALKKGSMDNMAAVVVPLESAKSSANSLRRSYTENEDAGFPSFGLQESAYRSSANDITSDLLHLEHPHLLDTKFKRILVEVKHGDFGCFYLSENLDDSVDSKWPPKKDDREDYLYELPQPLPDALHQQAAVDGPVILYNDQNFCFHLSSTINQAKDQCINPEGFASFIGLLESIPLIDAGSDNESSDYSMPDSR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0534 424 CDD PP2Cc 2 248 IPR001932 -
Tpr5g0534 424 Pfam Protein phosphatase 2C 16 241 IPR001932 -
Tpr5g0534 424 ProSiteProfiles PPM-type phosphatase domain profile. 1 248 IPR001932 -
Tpr5g0534 424 PANTHER ALPHABET, ISOFORM E-RELATED 6 411 - -
Tpr5g0534 424 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 6 411 - -
Tpr5g0534 424 Gene3D - 2 256 IPR036457 -
Tpr5g0534 424 SUPERFAMILY PP2C-like 5 249 IPR036457 -
Tpr5g0534 424 SMART PP2C_4 1 246 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0534 Tpr-Chr5 7951870 7956000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0534 11 316 PP2C-type Phosphatase Gene Family AT3G63320 52.941 1.31e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0534 - - gmx:100781476 682.174