Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0518 ATGGCTTCCAAGAATCACTATGTCCAACTACCTTCTGAATCCCAAAAACCAGTTGCTGATTCCGAACCAAATCCCCAACTACAGGCCCGATCCTCAGCTCAAGCCCAGACCAGTCTTACATCCGGAAAAAAGCGTGATGTTGAAGACAAAAATGCAAACGGAAATACCTCAAAACGTTTGAAAAAGAAAAAAGAAACTGTTTTTGCCGCTGCTAGTGGTGGTTCTGGTGAAGAGAAGAATGATTGCACGGAGGAGAAAAAATCAAAGAAGAAGAGTGGTGGAAGAGTCTTCAGCGAAAAAGACGATCTTCTTATTTTGCGTGGTCTTGCTGATTTCATTTCCAAAACTCGAAAGCATCCTTTGAAGCATGCAGCTGAATTTCACTATTTCATGCGGGAGGAGAAATCATTTCGTTCAGATTTGAGGAACAGTCAAATTAAGCGGAAAATTCGAACTTTAAAAGACAAGTTTGAAAAAAGACGGGTTTTCACTGTACCGCATGATAAAAAAGCTTTTAAACTCTTCAATAAGATTATTTGGACAAATAATGATGAGAATGGAGCTGCAGAAGAAAATCAAAACGAGGTGGAAAGTAGCGTGGGTTATATTTTGAATGAAATTTTTAGGTGTGATGTTGATATGGCTTTGGATTGGAATGATGCTAAAAAGGGATTGAAATCGACAGAGGAATCATCGAGGGCGGAAATGGAAGAAAAGTGGAGGAAGCTTCATATTGAGGAGATGAACCTCGTTGTGACTCAGACGCAGTACGCTAAGGATCGGGTCAGGTTGGGCTTGTAG 801 0.4057 MASKNHYVQLPSESQKPVADSEPNPQLQARSSAQAQTSLTSGKKRDVEDKNANGNTSKRLKKKKETVFAAASGGSGEEKNDCTEEKKSKKKSGGRVFSEKDDLLILRGLADFISKTRKHPLKHAAEFHYFMREEKSFRSDLRNSQIKRKIRTLKDKFEKRRVFTVPHDKKAFKLFNKIIWTNNDENGAAEENQNEVESSVGYILNEIFRCDVDMALDWNDAKKGLKSTEESSRAEMEEKWRKLHIEEMNLVVTQTQYAKDRVRLGL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0518 266 MobiDBLite consensus disorder prediction 78 94 - -
Tpr5g0518 266 MobiDBLite consensus disorder prediction 1 94 - -
Tpr5g0518 266 MobiDBLite consensus disorder prediction 1 41 - -
Tpr5g0518 266 PANTHER STOREKEEPER PROTEIN 14 263 - -
Tpr5g0518 266 PANTHER BNAANNG10740D PROTEIN-RELATED 14 263 IPR007592 GO:0006355
Tpr5g0518 266 MobiDBLite consensus disorder prediction 42 66 - -
Tpr5g0518 266 Pfam Protein of unknown function, DUF573 95 178 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0518 Tpr-Chr5 7713225 7715081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0518 29 180 GeBP Transcription Factor Family AT1G61730 33.333 7.26e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g0518 DUF573 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0518 - - mtr:MTR_2g010790 156.762