Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0516 ATGGCAAAACTATCAAAACAACAAACTCAGAAAAACAATAATGCAAATAGCAGTGTTAATAATACCAAAGTGAAAAGAACAAGGAGAAGTGTCCCTAGAGATTCCCCAATTCAACGCAGCTCAATATACAGAGGAGTCACTAGGCACAGATGGACAGGTCGATATGAAGCTCATTTGTGGGACAAAAATTGTTGGAATGAATCCCAAAACAAGAAAGGACGACAAGTCTACCTTGGGGCTTATGATGATGAAGAGGCGGCAGCACATGCTTATGATCTAGCTGCATTGAAATATTGGGGTCCAGATACCATTCTTAACTTCCCGTTATGTACCTACCAGAATCAATTGAGAGAAATGGAGGATCAGTCAAGGGAGGAGTATATTGGATCGCTAAGGAGGAAAAGTAGCGGTTTTTCTCGAGGAGTTTCTAAATACCGAGGTGTAGCAAGACACCATCACAATGGAAGGTGGGAGGCTCGTATTGGCAGGGTATTTGGCAACAAATATCTTTATCTTGGAACATATGCTACACAAGAAGAAGCAGCCACCGCATACGATATGGCAGCTATTGAATATCGTGGACTCAATGCTGTTACCAATTTTGACCTTAGCCGTTATATTAAGTGGCTTAAACCTAATCATCATAACAATAACAACGAAAATAACACCAAACTTATTCATAATTCTAATCCAACAATCTGTGACACAAATGAAGAACAAAGACTTAACTTGTTTCACACTCAAAACGAGTCATTTGGAACTGAAGAAAAAGAAGCAATAACAACAATAACACAGCCTCGTCCAAGTGGCGGCGCCACGTCAGCATTAGGTCTTTTGCTTCAATCTTCAAAGTTTAGGGAGATGATGGAAATGACAAGTAGTACTGCTGCTGCTGATGATTTGTCCACAACACCACAAAAGTCATACACATTTCCTGATGACATTCAAACATACTTTGAGTGTAGTGATGATCATAATTCTTCTTCCACTAAATATGGAGAAGGGGATATTGATTTCTTCAATGACTTGAACTTCAATGGGTTCCACTTTGCTTGA 1056 0.3958 MAKLSKQQTQKNNNANSSVNNTKVKRTRRSVPRDSPIQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGPDTILNFPLCTYQNQLREMEDQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNHHNNNNENNTKLIHNSNPTICDTNEEQRLNLFHTQNESFGTEEKEAITTITQPRPSGGATSALGLLLQSSKFREMMEMTSSTAAADDLSTTPQKSYTFPDDIQTYFECSDDHNSSSTKYGEGDIDFFNDLNFNGFHFA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0516 351 CDD AP2 143 204 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 Pfam AP2 domain 143 194 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 Pfam AP2 domain 42 100 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g0516 351 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 334 - -
Tpr5g0516 351 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 334 - -
Tpr5g0516 351 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 SMART rav1_2 42 114 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 Gene3D AP2/ERF domain 42 110 IPR036955 GO:0003700|GO:0006355
Tpr5g0516 351 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Tpr5g0516 351 ProSiteProfiles AP2/ERF domain profile. 42 108 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 SUPERFAMILY DNA-binding domain 143 204 IPR016177 GO:0003677
Tpr5g0516 351 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Tpr5g0516 351 SUPERFAMILY DNA-binding domain 41 109 IPR016177 GO:0003677
Tpr5g0516 351 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0516 Tpr-Chr5 7676546 7680090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0516 138 220 AP2-EREBP Transcription Factor Family AT5G57390 38.462 7.33e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tpr5g0516 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0516 K09285 - gmx:100795869 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3247 2 36167932 36171016 Tpr5g0516 5 7676546 7680090 PCT