Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0512 ATGGACTTCAAAAAGGGCAACAAGCTTGTTAGGTTCAACTCAGATGGCAAAAACCATAAACAACCACCACCACCACCATCATCATCTTCTTCAATGCTTAAACCTAATAGTAGCAATGTTATACCATTAGGGAAAAATAGAAAATCACGATCTAAGGTATTTCCAGAAGATCATGAACCATGGAGAAAAAGAATACTTGATCCTGGTAGCGAGATTGTGTTGAAATGGAATCGAATTTTTATAGTTTCTTGTTTGGTAGCACTTTTTGTTGATCCTTTATATTTTTATTTGCCTAGTGTATTGGTACAAAATACAGACTCTTCTTGTGTTAGGACTGATTTTACATTAAGGATTGTTGTCACATTTCTTCGAACTGTTGCCGATGTTTTTTATCTGTTACACTTGATTATTAAGTTCAGGACAGCTTATGTTGCTCCTAGTTCGCGTGTATTTGGAAGGGGTGAACTTGTTATGGACCCGAGTAAAATTGCAAGGCGGTATATTAGATCTGATTTCTTCATTGATCTTATTGCTACACTACCGTTACCACAGATGGTCATCTGGTTTATCATACCGGCTACAAGGACTCCTCAGACTGATCACAAGAATAATGCTCTTGCATTGATTGTCTTGCTCCAATATGTTCCAAGATTATATTTGATTTTCCCATTAAGTTCTCAAATAATCAAAGCAACCGGAGTGGTTACAAAGACTGCTTGGGCAGGAGCAGCATATAATTTGCTATTGTACATGTTGGCTAGCCATGTTTTAGGAGCATCCTGGTATCTTCTGTCTGTTGACCGGTATACTACTTGTTGGAAATCCTTATGCAAAAAGGAGCGTAACCCTGACAATTGCTTTCTCTACCTAGACTGCAGTTCTTTGAGTAATGATATGCGCAAGATATGGGAAAATAGTACAGATGTGTTTAAAAGTTGTGACCCCAAGAATGATGACATTCAGTTCAAGTATGGGTTATTTGAAAATGCATTAACAAAGAATGTTGTCTCTTCAAACTTCATACCAAAATACTTATATTGTTTATGGTGGGGGTTGCAGCAACTAAGTTCTTACGGACAGAACCTAGATACAACCACATTTATTGGAGAAACGTCATTTGCTATTGTGATTGCCATCTTGGGTCTTGTATTATTTGCTCATTTGATTGGGAACATGCAGACATATTTACAATCAATTACTATAAGGCTTGAGGAGTGGAGGCTAAAGCGAAGAGACACAGAGGAGTGGATGGGACATCGGCAACTCCCTGAAGATTTGAGATTTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCAACTCGTGGTGTTGATGAAGAAACCATTCTACGTTCATTGCCAGCTGATCTTCGTCGTGATATCCAACGCCACCTATGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCACAAATGGATGATCAACTTCTTGATGCGATATGTGAGCGGCTGGTATCTTCTCTAAGCACTCTAGGCACCTACATTGTTCGTGAGGGTGACCCTGTAACTGAAATGCTGTTTATCATTAGAGGCAGACTAGACAGTTCTACAACAAATGGTGGCCGGACTGGTTTTTTCAACTCAATCATATTGAGACCTGGAGATTTTTGCGGTGAGGAACTTCTTTCTTGGGCACTACTCCCAAAATCAACCATGAATTTGCCGTCTTCAACTAGGACAGTTAAAGCCCGGAGTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGATCTAAAGTTCGTCGCTAATCAATTTAGGCGCCTTCACAGCAAAAAGCTGCAGCACACCTTTCGATTTTACTCTCATCATTGGAGGACTTGGGCCGCTTGTTTTATACAGGCTGCTTGGCGTCGATATAAGAAAAGGATGTCTGCCAAAGATCTTGGTTTGAGGGAATCCCTTCCTTTAGATGAGACAGTGGTCAGTGAGAGATTACAAGAGGAGGAATATCCTATCGGTTCAAACTCATCACAGGCTAAATTGAACCTCGGGGTCACAATTCTTGCTTCAAGGTTTGCTGCTAACACACGAAGAGGAGCTCTAAAGATGAAAGACGACCTGCCTAAGCTTCGAAAGCCAGAAGAGCCTGACTTCTCCAATGAAGCAGATGATGATTAG 2136 0.4045 MDFKKGNKLVRFNSDGKNHKQPPPPPSSSSSMLKPNSSNVIPLGKNRKSRSKVFPEDHEPWRKRILDPGSEIVLKWNRIFIVSCLVALFVDPLYFYLPSVLVQNTDSSCVRTDFTLRIVVTFLRTVADVFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPSKIARRYIRSDFFIDLIATLPLPQMVIWFIIPATRTPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVDRYTTCWKSLCKKERNPDNCFLYLDCSSLSNDMRKIWENSTDVFKSCDPKNDDIQFKYGLFENALTKNVVSSNFIPKYLYCLWWGLQQLSSYGQNLDTTTFIGETSFAIVIAILGLVLFAHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMGHRQLPEDLRFRVRRFVQYKWLATRGVDEETILRSLPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTMNLPSSTRTVKARSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLGLRESLPLDETVVSERLQEEEYPIGSNSSQAKLNLGVTILASRFAANTRRGALKMKDDLPKLRKPEEPDFSNEADDD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0512 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 707 - -
Tpr5g0512 711 MobiDBLite consensus disorder prediction 689 711 - -
Tpr5g0512 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 45 707 - -
Tpr5g0512 711 MobiDBLite consensus disorder prediction 1 15 - -
Tpr5g0512 711 ProSiteProfiles cAMP/cGMP binding motif profile. 475 605 IPR000595 -
Tpr5g0512 711 MobiDBLite consensus disorder prediction 689 704 - -
Tpr5g0512 711 Gene3D Helix hairpin bin 403 466 - -
Tpr5g0512 711 SUPERFAMILY cAMP-binding domain-like 405 597 IPR018490 -
Tpr5g0512 711 PRINTS EAG/ELK/ERG potassium channel family signature 135 144 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr5g0512 711 PRINTS EAG/ELK/ERG potassium channel family signature 252 262 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr5g0512 711 PRINTS EAG/ELK/ERG potassium channel family signature 370 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr5g0512 711 PRINTS EAG/ELK/ERG potassium channel family signature 388 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr5g0512 711 PRINTS EAG/ELK/ERG potassium channel family signature 438 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr5g0512 711 Pfam Ion transport protein 76 401 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr5g0512 711 Pfam Cyclic nucleotide-binding domain 499 586 IPR000595 -
Tpr5g0512 711 SMART cnmp_10 475 606 IPR000595 -
Tpr5g0512 711 CDD CAP_ED 475 606 IPR000595 -
Tpr5g0512 711 Gene3D - 79 400 - -
Tpr5g0512 711 SUPERFAMILY Voltage-gated potassium channels 70 397 - -
Tpr5g0512 711 Gene3D Jelly Rolls 473 593 IPR014710 -
Tpr5g0512 711 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0512 Tpr-Chr5 7608687 7617101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0512 1 710 Ion Channels AT4G30360 69.751 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0512 K05391 - gmx:100808425 1245.34