Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr5g0501 | ATGGTGAATGCAATAACAGCAGCAATTGGAGATTTAGTATTGACTTTCATATGGATGTTCATTACTTCTACCCTTGGATTAGTAACAACAGAAATTCTCAATTTTCTTGATCTTCAATTTGTCTCTTATAATGGTGTTAATTACCCTTTTATTGTAATCACAACTTTTCTAATTTTCATTATTATATTTACTTTTACTGCCATTGGTAATGCTATGGGTGGTGCCAGTTTCAACCCTACAGGCAATGCTTCTTTCTATGCTGCTGGTCTTGGTTCTGATACCCTTTTCTCTATGGCTCTTCGTTTCCCTGCTCAGGCATTAGGTGCAGTGGGTGGTGCTATGGCAATTAAAGAAGTAATGCCACCAAGATATAGCCACATGATCGGAGGACCTGCTTTGAAGGTTGATTTGCATACTGGAGCTATTGCAGAAGGAGTGTTGACATTTGTAATCACTTTTCTTGTTCTCTTCATCTTGCTCAAAGGTCCTCGTAGCGAATTTATGAAGACTTTGTTGATGGCTATGTCGACCGTGGCTATGATCCTCGCTGGTTCTGCTTACACCGGACCAGCAATGAACCCTATCCTTGCATATGGTTGGGCATACCTAGATAACTGGCACAACACATGGGACCAATTCTATGTTTACTGGATTTGTCCTTTCATTGGATCAATACTTGCTGCTTGGCTGTTTCGTGCTGTTTTCCCTCCAAAAGTGGCAAAACAAAAGAAAGCATGA | 738 | 0.4038 | MVNAITAAIGDLVLTFIWMFITSTLGLVTTEILNFLDLQFVSYNGVNYPFIVITTFLIFIIIFTFTAIGNAMGGASFNPTGNASFYAAGLGSDTLFSMALRFPAQALGAVGGAMAIKEVMPPRYSHMIGGPALKVDLHTGAIAEGVLTFVITFLVLFILLKGPRSEFMKTLLMAMSTVAMILAGSAYTGPAMNPILAYGWAYLDNWHNTWDQFYVYWICPFIGSILAAWLFRAVFPPKVAKQKKA* | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr5g0501 | 245 | PANTHER | AQUAPORIN SIP1-1 | 3 | 245 | IPR044222 | GO:0015250 | |
| Tpr5g0501 | 245 | Pfam | Major intrinsic protein | 4 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | Gene3D | Glycerol uptake facilitator protein. | 2 | 244 | IPR023271 | - | |
| Tpr5g0501 | 245 | PANTHER | AQUAPORIN SIP1-1 | 3 | 245 | - | - | |
| Tpr5g0501 | 245 | SUPERFAMILY | Aquaporin-like | 4 | 239 | IPR023271 | - | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 58 | 82 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 97 | 116 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 143 | 161 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 174 | 196 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Tpr5g0501 | 245 | PRINTS | Major intrinsic protein family signature | 214 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr5g0501 | Tpr-Chr5 | 7478245 | 7483145 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr5g0501 | 2 | 244 | Major Intrinsic Protein MIP | AT5G18290 | 50.000 | 2.06e-77 | 232 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr5g0501 | K09875 | - | gmx:100788738 | 365.155 |
Event-related genes