Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0500 ATGGACCTCGAATCCACCAAAATGTTGAAACACTCCGGCCGCCATTCACCGCCGCCGGAGTCCTTCGCCGACAAGATCTACCAATTCCGCGGCGCCTTTCTAATGGTGGCACTTCCTCTCCTCCTCGTCACACTTATACTTTACGTCAGGCCTTCCGCTTCTTCCAATGAATCAATCGAAGATTACGCCCTTACGCACCGTAAGATTTCTCCCGATCGTATACCGTCGGAATCTTTTGCCGTCATTTTCGACGCTGGTAGCTCCGGAAGCCGCGTTCACGTCTTTCGATTCGATCGGAATCTTGATCTCGTTCACATTGGTAAAGATCTTGAGGTTTTCTTGCAGCTTAAACCTGGTTTGAGTGCTTATGCACAGTATCCACAACAGGCAGCAGAATCTCTTATTTCTCTTTTGGATAAAGCGGAAAGTGTTGTTCCTTTGGAGTTTCGCTCCATGACACCAGTTAGAGTTGGGGCAACTGCAGGATTGAGGGCTTTGGAAGGGGATGCTTCTGATAAGATCTTGCAAGCGGTCCGAGATTTGCTTAAGCAAAGAAGTACTCTAAAATCCGAGCCTAATGCGGTTGCTGTGCTAGATGGAAACCAAGAAGGTGCTTTTCAATGGGTGACTATTAACTATCTATTGGGAAAGTTGGGAAGAGATTATTCAGACACTGTTGGAGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCAATCTCAGAGACAAGTGCTGCCAAGGCTCCAAAAAAAGTACCGGATGGAGAAGACCCTTATGTCAAGGAGATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTACTAGCAGCTCGTGCTGAGAGTTTAAAGCAATCTGATGATTCTGGAAACCCTTGCATCTTAGCTGGCTATGATGGATCTTACAAGTATGGAGGTAAGTCATTTAATGCCTCGTCCTCCCCTTCTGGCTCAAGCTTGAATGAATGCAAAAGTATAGCTCGTAAGGCTCTCAAGGTTGATGAGTCACCATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGCGGTGATGGACAGAAGAACCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCTGCCGAGGCTGGTTTTGCTGATCCAAAATCACCCGTTGCAAAAGTGCGTCCTGTTGATTTTGAGGATGCAGCTAAGAAAGCTTGTCAAACAAAACTCGAGGATGCCAAATCCACTTATCCACACGTTGAGGATGGGAACCTTCCATATTTATGCATGGATCTTGTATACCAGTATACATTGCTTGTTGTTGGATTCGGCCTAGATCCATTTCAGCAGATTACATTAGTGAAGCAAGTTAAATATCATGATTCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTATCATCTATACGATGA 1449 0.4548 MDLESTKMLKHSGRHSPPPESFADKIYQFRGAFLMVALPLLLVTLILYVRPSASSNESIEDYALTHRKISPDRIPSESFAVIFDAGSSGSRVHVFRFDRNLDLVHIGKDLEVFLQLKPGLSAYAQYPQQAAESLISLLDKAESVVPLEFRSMTPVRVGATAGLRALEGDASDKILQAVRDLLKQRSTLKSEPNAVAVLDGNQEGAFQWVTINYLLGKLGRDYSDTVGVVDLGGGSVQMAYAISETSAAKAPKKVPDGEDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAESLKQSDDSGNPCILAGYDGSYKYGGKSFNASSSPSGSSLNECKSIARKALKVDESPCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPKSPVAKVRPVDFEDAAKKACQTKLEDAKSTYPHVEDGNLPYLCMDLVYQYTLLVVGFGLDPFQQITLVKQVKYHDSLVEAAWPLGSAIEAVSSIR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0500 482 CDD NBD_sugar-kinase_HSP70_actin 81 240 - -
Tpr5g0500 482 Pfam GDA1/CD39 (nucleoside phosphatase) family 76 480 IPR000407 GO:0016787
Tpr5g0500 482 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 19 480 IPR000407 GO:0016787
Tpr5g0500 482 Gene3D - 79 475 - -
Tpr5g0500 482 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 198 213 IPR000407 GO:0016787
Tpr5g0500 482 PANTHER APYRASE-LIKE PROTEIN 19 480 - -
Tpr5g0500 482 Gene3D Exopolyphosphatase. Domain 2 199 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0500 Tpr-Chr5 7466393 7476060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0500 13 480 Calmodulin-binding Proteins AT3G04080 67.591 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0500 K14641 - gmx:100804818 750.355