Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0493 ATGGAGAATGAGCAATGGTGCAGCATATGCTCTAAAATGGTAAGTCCAATGATTGAATCAAGAAACAAATGTCCATTTTGTGATACACAATTTGGTGTAGAAATGGAAAATCTTAGAGACCATAATAATGATGCTATTGATTTAAGGTCAGCTTGGGTTTTTTCACTTTATGCACCAATTTTTCTTGGTTTAATGAATGCTTTTAGTCCTTCTCTAGCTACAATTTCTTCACAAGAAAGTAGCACCTCAAGAAATGAAGAAAATAATGAACAAGAGAGAGGAAATTACAATGAACTTGTAATTGGAAGAAGGAGAAGAACTTCAACTTATATGATGCATCTATTTAGAGGACTTCATGTTAGAATGGTTTCTGAAAATGAAAACATAGAACAAAATAGGAACATTGAGAATAATAACAATAATAATAACAATACTACTAATAATAATAGTATATTTGTTATTGATCCATTCAATGAAGGTGCATTAATTGTGAGAGGTCCTAATTTAAATCATACAAATAGTGGATTTGATTTATTGCTACAACATTTGGCACAAATTAACCCTAGTGGTTATGCTAGTGTGAATCCTCCAACAAAGAAGGAAGCAATTGAAGAAATGGAAAATGTGATAAATGATGAGAAATTGCTATGTACTATATGTTTGGAAGATGTTGAGATTGGAAGTATAGCTAAAGAAATGCCATGTAAGCATAAATTTCATGATGAATGTATTGTATCATGGCTTAATCTACATAGTTCTTGTCCAGTTTGTAGGTTTCAAATGCCTTCTGAGGATTCAAATGTTTTGGCTAATTTGGAAATTGGAAATAGGGAGAATCAAAATAATGAGGTTGTGAGAGGTCGAAATGGAAGGAGGAATTGGTTTCCGGTGCTTCAATCTTTTAATAATTTCCTTCCTTTTCCTTGA 927 0.3204 MENEQWCSICSKMVSPMIESRNKCPFCDTQFGVEMENLRDHNNDAIDLRSAWVFSLYAPIFLGLMNAFSPSLATISSQESSTSRNEENNEQERGNYNELVIGRRRRTSTYMMHLFRGLHVRMVSENENIEQNRNIENNNNNNNNTTNNNSIFVIDPFNEGALIVRGPNLNHTNSGFDLLLQHLAQINPSGYASVNPPTKKEAIEEMENVINDEKLLCTICLEDVEIGSIAKEMPCKHKFHDECIVSWLNLHSSCPVCRFQMPSEDSNVLANLEIGNRENQNNEVVRGRNGRRNWFPVLQSFNNFLPFP* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0493 308 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 2 307 - -
Tpr5g0493 308 SUPERFAMILY RING/U-box 205 263 - -
Tpr5g0493 308 ProSiteProfiles Zinc finger RING-type profile. 217 258 IPR001841 -
Tpr5g0493 308 Pfam Ring finger domain 217 258 IPR001841 -
Tpr5g0493 308 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 307 - -
Tpr5g0493 308 SMART ring_2 217 257 IPR001841 -
Tpr5g0493 308 MobiDBLite consensus disorder prediction 76 95 - -
Tpr5g0493 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 264 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0493 Tpr-Chr5 7367381 7368385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0493 137 284 C3H Transcription Factor Family AT1G26800 34.899 1.24e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0493 K11982 - cam:101512035 429.483