Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0487 ATGGATAAACTTAATAATTACTACACATTTACCATCACAGTGGAAGAAGTAGTTGTATCTTCCGATGGAGAGGAAATCAATGAAGAAAATAATACATGCGAGGATAGTTTAGAAGCAAATATTGTTCATGAAGGTGAAAAACCTCATGTTGGAATGATATTTAGCTCTATAGATGAACTTACAGAGTATTACAAAAGATATGGTCAGTCTATGGGTTTTGGAGTTACTAAACGTAGTAGCAAAAATGGAGATGATGGAAAAAAATATTTTACCCTAGCATGTAGTCGTGGAACAAAATATGTGAGCAAATCAAAGAATCTTTTGAAGCCAAATCCTATAACAAAAACTCAGTGTAAGGCTAGATTGAATGGATGCATTGGTTTAGATGGAACCGTTACTATTTCAAGAATTGTTCTTGAGCATAATCATGACGTAAGTCCTACTAAAGCACGCTATTTTAGAAGTAGTAAGAAGTTGGAGCCTCATTTAAAAAAGAGGTTAAAACTCAACGATCAAGCTGGAATAAATGTAAGCAGAAATTTTCGATCTTTGGTTATTGAAGCGGGTGGATATGATAATTTGACATTTGGCGAAAAGGATTGTAGAAACTACATAGATAAAGTAAGGAGATTGAGACTTGGGACAGGAGATGCTGATGCGATTCAAAACTATTTTGTTAGAATGCAAAAGAAAAATAGCCAATTCTATTATGTAGTAGACATTGATGATAATAGTCGTCTTCGAAATGTGTTTTGGGTTGATGCAAGATGTAGGGTTGCATATGAATATTTTGGTGAAGTTGTTACATTTGACACAACTTACCTAACAAATAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCACGGTCAATCTGTGTTGTTGGGTTGTGCTTTATTATCGAATGAGGATACCGAGACATTTACTTGGTTGTTCAGTACATGGTTAGATAGCATGCATGGACACACTCCAAATGCCATAATTATTGATCAAGACAAAGCCATGAAAAATGCAATTGAGGTTGTATTTCCAAAAGCTCGTCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGTTAGGTAGACGCTCTGATTATGAGTCTATCAAAGAACTTTTACATTATGTTGTATATGACTCTTTGAGTAAAAGTGATTTCATGGAAAAGTGGGAAAAAATGATTGAAGATTTTAAACTTCAGGATAACGAATGGTTGAAGGGCTTATTTGATGAAAGAAATCGTTGGGTTCCTGTATTTTTGAGAGACACATTTTGGGCAGGAATGTCAACAACACAAAGAAGCGAAAGTATGAACTCATTTTTTGATGGCTATGTAAATTCAAAAACAACATTGAAGCAATTTGTTGAACAATATGACAATGCACTGAGAGATAAAATTGAAAAGGAAAATTTGGCTGATTTTGGTTCATTTAATACATCGATAGCTTGTTTAAGTCATTATGGCTTTGAGTCTCAATTTCAGAAAGCATTCACCAATGCAAAATTCAAAGAATTTCAAGATGAGGTTACTGCTATGATTCATTGTCATACTTTCATTGAGAGATTAGATGGACTGAATTCTATATATTCTGTTATAAAAAGCAAGAAAAAATTTGACAAAATAAATGACATATTGTTCAAGGTATCCTTCAATGAGAAAGACTTTGAGATACAATGTATGTGTTGTTTGTTTCAATTCAAAGGTATTTTATGTAGACACATCCTTTGTGTGCTTAAGCTAATAGGGAAAACAGAGTCAATACCATCTTATTATATTTTCTCACAGTGGAGGAAGGATATAAGGCGAAGGCATACCCATATTAAATGTGGTTTTGATCATTTTGTTGGAAATGTTGAATTGCAAAGAGTTGATAAAGCTTGTGCTGCCTTTTATGAAGTGGCTTCTAAGGTGATAAATAGTGATCATGATTTTTTAAAAATGATGAATTGGATCAAGGACATAAAAGATGAATTTGCCTCTAAAGAAACATCCCCAACAAGCATTGTAGAAGAAGATGGTTCAGAACAAAATCAAGTGACTAAAATTCTTGACCCTGTAAAGACTCGATGTAAAGGTCGTCCTCCTTCGAATAGAAAGTCTTCTAAAGTTGATCAAATTGTGAAGAAACTTGCAAGAAAGAGGACCCAAAAAAGAAGCAAAAAAAAGGGAAAAGATCAAGGTCAAAAAGAGAACTTGTGTTCATCTAGAGTACAAGAGAGTGTTCAAGTAATTGATGGAATTGACACACGAGAGAGCATTCAATGTGAGCAAAGTAGTTTTGGGTGGAATGGACAAGGTGGTACAAATAATTTAGCTCCCTTCAATCCAAACTCAGTACTTATTAGTCAAGTAAATCAGGTTCCATTTTATTCTCAAGTCATGAATCATGGTGTATCCTATTTTGAATTACTACAGGCACAACACCATGTAAATGATCCGTCATCGTCAACACCACGCGAATCATACAGAGGCGAAGTGAATGATTAG 2505 0.3421 MDKLNNYYTFTITVEEVVVSSDGEEINEENNTCEDSLEANIVHEGEKPHVGMIFSSIDELTEYYKRYGQSMGFGVTKRSSKNGDDGKKYFTLACSRGTKYVSKSKNLLKPNPITKTQCKARLNGCIGLDGTVTISRIVLEHNHDVSPTKARYFRSSKKLEPHLKKRLKLNDQAGINVSRNFRSLVIEAGGYDNLTFGEKDCRNYIDKVRRLRLGTGDADAIQNYFVRMQKKNSQFYYVVDIDDNSRLRNVFWVDARCRVAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTETFTWLFSTWLDSMHGHTPNAIIIDQDKAMKNAIEVVFPKARHRWCLWHIMKKVPEKLGRRSDYESIKELLHYVVYDSLSKSDFMEKWEKMIEDFKLQDNEWLKGLFDERNRWVPVFLRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALRDKIEKENLADFGSFNTSIACLSHYGFESQFQKAFTNAKFKEFQDEVTAMIHCHTFIERLDGLNSIYSVIKSKKKFDKINDILFKVSFNEKDFEIQCMCCLFQFKGILCRHILCVLKLIGKTESIPSYYIFSQWRKDIRRRHTHIKCGFDHFVGNVELQRVDKACAAFYEVASKVINSDHDFLKMMNWIKDIKDEFASKETSPTSIVEEDGSEQNQVTKILDPVKTRCKGRPPSNRKSSKVDQIVKKLARKRTQKRSKKKGKDQGQKENLCSSRVQESVQVIDGIDTRESIQCEQSSFGWNGQGGTNNLAPFNPNSVLISQVNQVPFYSQVMNHGVSYFELLQAQHHVNDPSSSTPRESYRGEVND* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0487 834 SMART 26again6 563 590 IPR006564 GO:0008270
Tpr5g0487 834 Pfam MULE transposase domain 267 361 IPR018289 -
Tpr5g0487 834 Pfam SWIM zinc finger 554 584 IPR007527 GO:0008270
Tpr5g0487 834 PANTHER OS03G0843700 PROTEIN 24 658 - -
Tpr5g0487 834 Pfam FAR1 DNA-binding domain 62 146 IPR004330 -
Tpr5g0487 834 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Tpr5g0487 834 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 658 IPR031052 GO:0006355
Tpr5g0487 834 MobiDBLite consensus disorder prediction 691 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0487 Tpr-Chr5 7273200 7277354 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0487 MULE 3.7e-36 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0487 - - cam:101506732 1023.85