Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0484 ATGTATCGATTGAATGTGGGAGGCGCAGATATCAGTGCTCAAAATGATACACTCAGTAGGAATTGGGAGAGCGATGAAACTTACTTTCAGTCCACCACCACTGGTATGAATATTTCAACAAACATTTCTACTATCAAGCATCCTGATTTCATAGAATTTACAGCTCCACCAATGGTTTATATTATTGCTAAATCCTTGGGAAGTCTCTCAGGGGGTTACAATTTAAGCTGGGAATTCCGTGTAAGCCCAAATTTTTTGTACTTTGTTCGTGTGCATTTTTGTGACATGATTAGCAGCTCTACTAACTCTATGGTTTTGGATCTATTTATGAATGGATACATTGCTTTTCAAAGTCTTGACCTGTTAAGAGTTTCTGGTGACCTTGCTGAGCCGTATTACAAAGACTTTGTGTTGAAAAACACAGAGGAAACACTCACAGTAAGTGTTGGTCCTGCTACAATGTCTAGTATACGAAATGCAACGATGAATGGGATAGAGATAATGAAGTTCATTAACAAAGTTGATGCGTCAAAAAAAGAAAACAGAGTTAACAATGTTCTAACAAAAACTTCAGAACTAAGCAAGACATCAAAATTGGTCATTATAATTGGATGTGGCGTCTTTGTTGTAATATTTCTAGCATTTCTTGGACTATCATTTTGTTACTTAAAATCCTGCAGGTTGAAGAAAAATTCAGTAAATGCTTGCGAATTTCTGAGGCATTTTACTTTACATGAGATCCAACACGCAACAAATGGTTTTGATGCTGAGCTGCTTATTGGAGTAGGAGGATTTGGAAAGGTGTACAAAGGAACACTTGATAATGGGAAAATAGTAGCCATAAAAGTAGCCATTCCTGAATCTAGACAAGGTCTCGATGAATTCTATAACGAGATTGAGTTGTTGTATGGTCTTCGTCATCAAAACCTTGTCTCCCTTGTAGGTTGTTGTAATGAAGACTCTAAACTGATTGTGGTGTACAACTACATGGCAAATGGATCTCTCAGTAGTCATTTATATGGGAGGGACTTTGTTCCTCTGTCTTGGAAACAACGCCTTGTGATATGTTTAGGGGCTACAAAGGGGCTTTTATATCTTCACACTGGAGCTAAACAGAGCATAATTCACTGTGATGTCAAGACAACAAACATTCTCTTGGATGAAAAGTTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAAAGGGGTCCTCTTCTTGATAAAAGCCATGTTACAACCAATGTAAAGGGTAGTTTTGGCTATGTTGATCCAGAATATTTTTGGACTAAGTATCTCACTAAGAAATCAGATGTTTACTCATTTGGGGTGGTGTTGATTGAAGTTATATGTGGGAAGCCTGCTTTAGATGATACCCGTACGACACAGGAGATGAATTTGGCACTGTGGGCATTAAGCTGCCATAAAAAAGGTACTTTCAATGAAATGGTAGATCCATATTTGATTGGAAAAGTTAATATGGATTCTCTAAACAAGGTTTTAGAGTTGGCATGGAAGTGTTTGGAGGAGCGTCGGGTTAACAGACCATCAATGGGGTATGTATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCTTCACATGTTTTGAATGACAATGACATTGAATTTAGTGATGATATAGAAGCTGTTGTTTGA 1659 0.3767 MYRLNVGGADISAQNDTLSRNWESDETYFQSTTTGMNISTNISTIKHPDFIEFTAPPMVYIIAKSLGSLSGGYNLSWEFRVSPNFLYFVRVHFCDMISSSTNSMVLDLFMNGYIAFQSLDLLRVSGDLAEPYYKDFVLKNTEETLTVSVGPATMSSIRNATMNGIEIMKFINKVDASKKENRVNNVLTKTSELSKTSKLVIIIGCGVFVVIFLAFLGLSFCYLKSCRLKKNSVNACEFLRHFTLHEIQHATNGFDAELLIGVGGFGKVYKGTLDNGKIVAIKVAIPESRQGLDEFYNEIELLYGLRHQNLVSLVGCCNEDSKLIVVYNYMANGSLSSHLYGRDFVPLSWKQRLVICLGATKGLLYLHTGAKQSIIHCDVKTTNILLDEKFVPKVADFGISKRGPLLDKSHVTTNVKGSFGYVDPEYFWTKYLTKKSDVYSFGVVLIEVICGKPALDDTRTTQEMNLALWALSCHKKGTFNEMVDPYLIGKVNMDSLNKVLELAWKCLEERRVNRPSMGYVLCQLEEALHLELASHVLNDNDIEFSDDIEAVV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0484 552 Pfam Malectin-like domain 2 169 IPR024788 -
Tpr5g0484 552 Gene3D Transferase(Phosphotransferase) domain 1 330 548 - -
Tpr5g0484 552 CDD STKc_IRAK 260 526 - -
Tpr5g0484 552 SMART serkin_6 254 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0484 552 PANTHER OS07G0166700 PROTEIN 1 215 IPR045272 GO:0004714|GO:0006468
Tpr5g0484 552 PANTHER OS07G0166700 PROTEIN 233 536 IPR045272 GO:0004714|GO:0006468
Tpr5g0484 552 PANTHER OS03G0759600 PROTEIN 1 215 - -
Tpr5g0484 552 PANTHER OS03G0759600 PROTEIN 233 536 - -
Tpr5g0484 552 ProSiteProfiles Protein kinase domain profile. 254 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0484 552 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Tpr5g0484 552 SUPERFAMILY Protein kinase-like (PK-like) 238 525 IPR011009 -
Tpr5g0484 552 Gene3D - 1 171 - -
Tpr5g0484 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Tpr5g0484 552 Pfam Protein kinase domain 259 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0484 552 Gene3D Phosphorylase Kinase; domain 1 225 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0484 Tpr-Chr5 7251850 7254334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0484 1 533 Receptor kinase-like Gene Family AT2G21480 43.281 4.55e-158 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr5g0484 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0484 - - mtr:MTR_8g467150 835.484