Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0482 ATGTATCAGAATACAATTGATATGGCTACCGCTGCCACAACGCGGTCTCCAACTCAATGGAGTCGTGAAGACGCAAAGATTTTCGAAAGAGCTCTTTTGATGGTACCGGAGAATTCACCTAACCGGTGGGAGAAGATGGCTGAAAAAGTTCCCGGTAAGTCGGCTGCAGAAGTGAAGGATTACTATCAAGATTTGGTTCATGAAATTTCGGAAATTGAATCGGGTCGGGTTGAGATTCCGATTTATCCTGATGACTTGGATGAAAGTGATGACTTGGATGAAAGTGATGACTTGGCTGAAAGTGGTGGCAGTGGATTGTTTGATTCGATGAAAGAAACACCATGGACCGAAGAAGAACAAAGGTTGTTTCTTGCTGAGCTTGAGAAATATGAGAAAGAAGATTGGTTCAAGAAGCGTATCAAGATATTATCTTGGGACAAGAACACACACGGGTAG 456 0.4298 MYQNTIDMATAATTRSPTQWSREDAKIFERALLMVPENSPNRWEKMAEKVPGKSAAEVKDYYQDLVHEISEIESGRVEIPIYPDDLDESDDLDESDDLAESGGSGLFDSMKETPWTEEEQRLFLAELEKYEKEDWFKKRIKILSWDKNTHG* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0482 151 ProSiteProfiles Myb-like domain profile. 12 66 IPR001005 -
Tpr5g0482 151 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 11 135 IPR043363 -
Tpr5g0482 151 CDD SANT 114 137 IPR001005 -
Tpr5g0482 151 Gene3D - 11 79 - -
Tpr5g0482 151 MobiDBLite consensus disorder prediction 83 113 - -
Tpr5g0482 151 SUPERFAMILY Homeodomain-like 15 67 IPR009057 -
Tpr5g0482 151 SMART sant 16 68 IPR001005 -
Tpr5g0482 151 CDD SANT 20 66 IPR001005 -
Tpr5g0482 151 MobiDBLite consensus disorder prediction 84 98 - -
Tpr5g0482 151 PANTHER TRANSCRIPTION FACTOR DIVARICATA-LIKE ISOFORM X1 11 135 - -
Tpr5g0482 151 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0482 Tpr-Chr5 7218456 7219217 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr5g0482 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0482 - - gmx:548010 129.413