Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0468 ATGGATTTCACGTCAGGGAAGAATTCATCAGAGAACAACAACAACAACAACAACAATAACGCTGAAAACGCTTACCAAATCGTTGATTCTTCTTCTCAATTTGGTTCTGATTCCTACAATGTCAAAGAAACCGAAGAGCGTCAAGCTCGTGAACTCAAAGCTGGTCTTCATCCTCTCAAGACCAAGTTTGTATTTTGGTACACTCGTCGGGTTCCTGGAATTCGAAATCAATCATATGAGGACAACATTAAGAAGATTGTTGAATTCAGTACGGTTGAAGGATTTTGGGTCTGTTATTGCCATCTTACTCGTCCTTCTGCTTTGCCTAGTCCAACAGATCTGCACCTTTTCAAAGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGAAAATGGATTATACGATTCAAAAAGGCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTGCTTGCCTTGGTGGGTGACCAATTGGATTATGGTGATAACATATGTGGTGCGGTGCTAAGCATCCGATTCAACGAGGATATAGTGAGTGTCTGGAATCGCAATGCATCTGATAATCAGGCTGTTATGGCTTTGAGAGATTCAATTAAGCGTCACTTGAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGCGAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 708 0.4266 MDFTSGKNSSENNNNNNNNNAENAYQIVDSSSQFGSDSYNVKETEERQARELKAGLHPLKTKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVCYCHLTRPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDNQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0468 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 29 228 IPR023398 -
Tpr5g0468 235 MobiDBLite consensus disorder prediction 1 20 - -
Tpr5g0468 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 113 136 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Tpr5g0468 235 SUPERFAMILY eIF4e-like 48 231 IPR023398 -
Tpr5g0468 235 PANTHER BNAA10G16710D PROTEIN 44 235 - -
Tpr5g0468 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 44 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tpr5g0468 235 Pfam Eukaryotic initiation factor 4E 58 215 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0468 Tpr-Chr5 7061157 7064939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0468 26 235 Eukaryotic Initiation Factors Gene Family AT5G18110 78.774 1.11e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0468 K03259 - gmx:100499744 402.134