Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0462 ATGGATACAGGGATCACAGGATATAAACGTCTGAAAAATCCCGAGGAGAAAAAATTGCAAATCAAAAAGCGCAAATTAATTGACATTCCTAATCACATCAATGCATTACTGGTAGATGGTGTGACTGCAGCCAGGCGTTTGGAGCATCATATGCTTGAATCAATAGGAATTCGAACAGAGCCTGCATATAATGCTCAAGAAGCAATACAACTTTTATTGACTGGTGTGAAATTTGACTTCATCTTTGTTGATTTTGATTTGTCAATAATCAATGGACCTGAGCTGGTGAGGCAAATGCGTGCAATGGGGGTACAAAGTAAGGTGGTTGGTATGTTAACAAACTTCAATGACCATAATGTGCAAATGTTTCATGAAGCAAGAGCTAATGCCAGTATTCAAAAACCTTTGACCCGAGAAAGTTTTGAAATCATCACTGGAATCCTTCGCTATATATAA 456 0.3794 MDTGITGYKRLKNPEEKKLQIKKRKLIDIPNHINALLVDGVTAARRLEHHMLESIGIRTEPAYNAQEAIQLLLTGVKFDFIFVDFDLSIINGPELVRQMRAMGVQSKVVGMLTNFNDHNVQMFHEARANASIQKPLTRESFEIITGILRYI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0462 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 149 - -
Tpr5g0462 151 Gene3D - 11 147 - -
Tpr5g0462 151 SMART REC_2 33 147 IPR001789 GO:0000160
Tpr5g0462 151 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 149 - -
Tpr5g0462 151 SUPERFAMILY CheY-like 31 141 IPR011006 -
Tpr5g0462 151 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Tpr5g0462 151 Pfam Response regulator receiver domain 36 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0462 Tpr-Chr5 7022381 7023477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0462 33 138 Response Regulator Gene Family AT3G04280 33.945 4.08e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr5g0462 Response_reg 1.3e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0462 - K01079 cam:101509883 172.17