Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0452 ATGGCTCCCAGAAAACGTCTCCTCATCAACAATCCACCCAGCGTTACCACCACCACCTCTGAGTCTTCCGACGACGACAAAAATGATTATATCCAGCTTCCTTGTTCATCCAAGAAACAACCGGTAGTCGTCGAAGGAGAAGAAGAAATAGGAGATGAAGATTCATCATCCGAAGAAGAAGAAGAAGATTCTTCATCTGAAGAACTTCAACATTCTCAACCTGCTGCTTCCCAAAATCCTCCACCTTCTACGCCAAATTCAAACCCTAACCCTAAACCTGTTGCTTCTGCTGAATCCGGACCGAAACCCACTACACCTCATGATACCAAACTCAGACAACACGCTTCCAAGCCCATCAAAGCCCAACCACAGGCCCAATCATCAGCCCAAGCCCAAACCACTCCTAAATCTGGGAACAAACGTGCTAACGACGACAACAACGCCAATGGAAATGCTGCAAAACGTTCCAAAGGCAAAGAAACTGTTTCTGCCGCTGCTGGTGGTAGAATCTTCAGTGAAGGCGATGAACTCGCTATTCTGAGAGGAGTTGCTGACTTCCTTTCCAAAACTGGAAAGGATCCTTCGAAGAATATAGATTCTTTTCATGATTTTGTGAAGAACTCGCTTGGTGCTACGGTGACTAATCAGCAAATTAAGCGAAAAATTCGTGGCCTGAGGGAGAAGTATGAATCGGGTGATAATTTCATTAAACCCCATGACAAGAAAGCTTTAGAACTCTTCAAAAAGATTAAATGGGGAAACAATGGTGGGAATGTTGCTGGAGAAGAAAATGGAAAAGCTGTTGATGTGAAAAGTCCAAAGAAAGATGTTAATGTTAAAGTTAAGCATGTTGGTTCTTCTTCTAAAAATGTGGGAAGTGGTGTTGATAATAATTTCATTTTGAATGAAATTTTTCGTTCCAGGGATGCTAAGGGTTTGCCTTTGAACAAGGATGATGGAAAGCGATTGAACAAGGATGATGGAGAAAAAAGGTTAGAAATGATTGGTGAAAGCAGGAGGGCTGAAATGGTGCACCAATGGAGGCAGCTTCATGTCGCGGAATTGGAGGTTTTTGTGAATCGGGCGCAGTTAGTGAAAGATCATACTAGCTATTTATTGGAGGAACTCACTAAATCAACCCATTAG 1146 0.4276 MAPRKRLLINNPPSVTTTTSESSDDDKNDYIQLPCSSKKQPVVVEGEEEIGDEDSSSEEEEEDSSSEELQHSQPAASQNPPPSTPNSNPNPKPVASAESGPKPTTPHDTKLRQHASKPIKAQPQAQSSAQAQTTPKSGNKRANDDNNANGNAAKRSKGKETVSAAAGGRIFSEGDELAILRGVADFLSKTGKDPSKNIDSFHDFVKNSLGATVTNQQIKRKIRGLREKYESGDNFIKPHDKKALELFKKIKWGNNGGNVAGEENGKAVDVKSPKKDVNVKVKHVGSSSKNVGSGVDNNFILNEIFRSRDAKGLPLNKDDGKRLNKDDGEKRLEMIGESRRAEMVHQWRQLHVAELEVFVNRAQLVKDHTSYLLEELTKSTH* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0452 381 PANTHER BNAANNG10740D PROTEIN-RELATED 52 378 IPR007592 GO:0006355
Tpr5g0452 381 MobiDBLite consensus disorder prediction 1 164 - -
Tpr5g0452 381 Pfam Protein of unknown function, DUF573 169 250 IPR007592 GO:0006355
Tpr5g0452 381 MobiDBLite consensus disorder prediction 47 66 - -
Tpr5g0452 381 PANTHER STOREKEEPER PROTEIN 52 378 - -
Tpr5g0452 381 MobiDBLite consensus disorder prediction 119 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0452 Tpr-Chr5 6909453 6910850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0452 120 256 GeBP Transcription Factor Family AT1G61730 39.860 6.50e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g0452 DUF573 3.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0452 - - mtr:MTR_2g010790 201.445