Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0450 ATGGATAGACTCATAAGATTAGAACCATCAAACATAGTACTAATAAGAGTTGAACAAGGACAAAAATGTCAAGGAAAAATAACCTTAAACAATGTCATGTATACTATGCCAGTTGCATTTAGGATTCAACCATTAATCAAAACAAGATACACAATTAAACCTCAATCAGGAATAATTTCACCATTAGCATCACTAATCATAGAGATAACATATCATCCTCCACAACAACAAGGTTCAAATTCAAATTCAAATAATAATCTCCCTCACTCTTTTCCATTTTCAGATGATTCATTCCTTCTACATAGTGTTCTTGCTCCAGGAGCAGCTATCAAAGAACCTTCATCCATGTTTGATTCTGTTCCAAGTGATTGGTTCACTACCAAAAGAAAACAAGTTTTCATTGATAGTGCAATCAAAATCATGTTTGTTGGTTCACAAATTTTGACTCAACTTGTTGAAGATGGTAACTCAATGGATGATATAAGAGATGTTCTTGAAAAAAGTGATCCTTTATGGGAATCAGTTAACTCTAAAGATTCAAAAGGTCAAACTTTGCTTCATTTGGCTATTTCGAAAAATAGACCTGATCTTGTTCAATTGATCCTTGAATTCAAGCCTGATATTGAAGCTACAAATAGTGTTGGATCAACTCCTCTTGAGGCTGCATCTTCCTCGGGCAACTCATTAATCGTTGAGCTTCTTTTAGCTCATAAGGCCAACACAGAAGGATCAGAATCTTCGATCTTTCGACCGATTCATCATGCCTCGAGAGAAGGACATATGGAGATTCTAAGGCTTCTTTTACTCAAAGGTGCAAAAGTTGACTCTTTAACAAAAGATGGTAACACTTCTTTGCATTTAGCTGTTGAAGAAAAAAGAAGAGATTGTGCTAGGCTTTTGTTAGCGAACGGTGCGAGAACCGATGTTCGAAATACAAGAGAAGGTGATACACCTTTACACATAGCAGCAGCCAATGGAGATGAGAACATGGTAAAGTTATTACTTCATAAAGGAGCTACAAAATATGTGAGAAACAAATTAGGAAAAACAGCGTTCGATGTTGCGGCTGAGAACGGCCACTCGCGCCTGTTTGATGCGCTTCGTTTAGGGGACAATCTATGCACGGCTGCGCGAAAAGGTGAGGTAAGGACAATCCAAAAGGTTTTGGAAAGTGGTGGAGTGATCAATGGAAGGGATCAAAATGGATGGACATCACTTCATAGGGCTTCATTCAAAGGAAGAATGGATGCTGTTAGGTTTCTTGTGGAGAAAGGTATTGATTTGGATGCAAAAGATGAAGATGGTTATACAGCTTTGCATTGTGCAGCTGAATCAGGACATGCTGATGTGACTGAGTTTTTGGTTAAGAAAGGTGCTGATGTTGAAGCAAGGACTAATAAAGGTGTGAGTGCTTTGCAAATTGTTGAGTCATTGAACTATGTAGGGATTACAAGGATACTTGTTAATGGTGGTGCTAGTAGGGAAGGTTTGGGTGAAAAATTTCCATCTGCACCTTCTAAGATTCCATTTGGGAGTAAAGTTGAAGGTGGGAGTGTGATGACAATGAAGAAGAAGATGAGTAGTAGAACTCGAGCGCTAAGAGGTAGTTTCGACCGTTCGATGCCTTTGGCAGTGCTCTAG 1641 0.3863 MDRLIRLEPSNIVLIRVEQGQKCQGKITLNNVMYTMPVAFRIQPLIKTRYTIKPQSGIISPLASLIIEITYHPPQQQGSNSNSNNNLPHSFPFSDDSFLLHSVLAPGAAIKEPSSMFDSVPSDWFTTKRKQVFIDSAIKIMFVGSQILTQLVEDGNSMDDIRDVLEKSDPLWESVNSKDSKGQTLLHLAISKNRPDLVQLILEFKPDIEATNSVGSTPLEAASSSGNSLIVELLLAHKANTEGSESSIFRPIHHASREGHMEILRLLLLKGAKVDSLTKDGNTSLHLAVEEKRRDCARLLLANGARTDVRNTREGDTPLHIAAANGDENMVKLLLHKGATKYVRNKLGKTAFDVAAENGHSRLFDALRLGDNLCTAARKGEVRTIQKVLESGGVINGRDQNGWTSLHRASFKGRMDAVRFLVEKGIDLDAKDEDGYTALHCAAESGHADVTEFLVKKGADVEARTNKGVSALQIVESLNYVGITRILVNGGASREGLGEKFPSAPSKIPFGSKVEGGSVMTMKKKMSSRTRALRGSFDRSMPLAVL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 214 246 IPR002110 GO:0005515
Tpr5g0450 546 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 546 - -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 181 213 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 401 433 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 434 466 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 401 433 - -
Tpr5g0450 546 Gene3D Immunoglobulins 1 139 IPR013783 -
Tpr5g0450 546 PRINTS Ankyrin repeat signature 315 330 IPR002110 GO:0005515
Tpr5g0450 546 PRINTS Ankyrin repeat signature 450 464 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 314 339 - -
Tpr5g0450 546 Pfam MSP (Major sperm protein) domain 5 115 IPR000535 -
Tpr5g0450 546 Pfam Ankyrin repeats (3 copies) 251 310 IPR002110 GO:0005515
Tpr5g0450 546 Pfam Ankyrin repeats (3 copies) 176 240 IPR002110 GO:0005515
Tpr5g0450 546 Pfam Ankyrin repeat 315 339 IPR002110 GO:0005515
Tpr5g0450 546 Gene3D - 140 244 IPR036770 -
Tpr5g0450 546 SMART ANK_2a 181 210 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 280 309 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 347 376 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 401 430 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 247 276 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 214 243 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 314 343 IPR002110 GO:0005515
Tpr5g0450 546 SMART ANK_2a 434 463 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 434 466 - -
Tpr5g0450 546 Pfam Ankyrin repeats (many copies) 403 455 IPR002110 GO:0005515
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 214 240 - -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 181 212 - -
Tpr5g0450 546 SUPERFAMILY Ankyrin repeat 174 495 IPR036770 -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 251 275 - -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 251 279 IPR002110 GO:0005515
Tpr5g0450 546 Gene3D - 319 367 IPR036770 -
Tpr5g0450 546 SUPERFAMILY PapD-like 2 156 IPR008962 -
Tpr5g0450 546 Gene3D - 368 496 IPR036770 -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 314 346 IPR002110 GO:0005515
Tpr5g0450 546 Gene3D - 245 318 IPR036770 -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat profile. 280 312 IPR002110 GO:0005515
Tpr5g0450 546 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 546 - -
Tpr5g0450 546 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 143 IPR000535 -
Tpr5g0450 546 ProSiteProfiles Ankyrin repeat region circular profile. 280 311 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0450 372 474 Ion Channels AT4G32500 32.039 4.23e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0450 - - gmx:100782444 759.985