Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0440 ATGGAAAAAAAGCTCTATCCAAAAGTGCTTCTAGTTTTAGTCACAATTTTTCTTTCAATTTCTTACACAAACCAACTTCAATCCACTCACACTCGAACCCTTTTACGAATCAAACGTCTCTTAAACTTTCCATCAATTTTAAGCTCTTGGAATTCAACCACAGATTTTTGCAACACAGATTCAAAAGCTTCTCTAAGTGTTGTATGCTATGAACAAACCATAACTCAGCTACACATAGTTGGTGAAACAAAACCTCAACAACTTCCAAAAAACTTCTCAATAGATTCATTTTTCACAACACTTTTGAGAATTCCAACTCTAAAAGTCCTCACACTAGTTTCCTTAGGGTTGTGGGGTCCACTTCCTAGCAAAATAAGTGGTTTATCATCTTTGGAAATTGTTAACATGAGTTCAAATTTTCTATATGGTAAAATCCCTCAAGAACTTCCATTGCTTTCAAATCTTCAAGCACTTATTCTTGATAACAATATGTTTGAAGGACATTTACCGGATTGGTTGGATTCGTTTCCATCGTTAACCGTTTTGAATTTGAATCAAAATTTGTTCAACGGTTCTCTTCCTGATTCGTTGAGTAGCTTAACAAATATGCGAGTTCTTTCGCTTTCTCATAACCGTTTCTACGGATCAGTACCGGATTTGAGCCGGTTGGTTAATCTTCAAGTGTTGGAATTGGATGATAATAGTTTTGGTCCTAACTTTCCTAGAACTTATAACAAGTTGGTTACTTGTGTTCTAAGAAACAACAAGTTTAGATCTAGTTTACCTGATAATATGAGTTCATATTATCAACTTGAGAGATTCGACATCTCGGAAAACGCCTTTGTTGGACCATTTCAGCTAGAATTGTTTTCACTTCCTGCAATTAGTTATATCAACATTTCAAGAAACAAATTATCAGGAATGCTTTTCGAGAATCTGTCGTGTAATTCTATTCTAGAAGAAGTTGATTTGTCTTCAAATCTTTTGACCGGAAGATTACCAAAATGTTTAGTGTTAAATTCCAATGATCGGAAAGTTTTGTATGGTGGAAACTGTTTAGAGGAAACAAATCAAAATCAACATGAACAAGCCTTTTGTCACACTGAAGCTATAGCTGTTGGAATAGGACTTAATGAGAGAAAGAAGCATAAAGGAGTATCTAAAACAGTTCTAGCTTTTGGGATTATTGGTGGAATTTTCGGAGGAATTTCACTTGTTGCTTTGATTTTTATGATTATGATTAGAAGACGAAATGGTAAAACCATTATGACGAAGAATTCGAAAACAAAATTGATATCAGAAAAAGCAGCATCTGGAAAGTTAATCACCGATTCAAGGCATGTACCTAAAGCAATGAAGTTTGGAACTGTTGGCCTGCCACCTTATAGAGCTTTCTCACTGGAAGAGATTGTGGCAGCTACTAACAACTTTGACACCACTTCTTTCATTGGTGAAGGTTCTCAAGGACAGATGAACAGAGGTCAACTAAAGGATGGTTCACTAGTTGCCATTAGAAGTGTAAAATTGACAAAAAGCTGCAGGACTAGAGATTTCATGCAGCACATAGAATTCATATCAAAATTCAGGCATCATCATTTAGTCAGTGTTCTTGGACATTGCTTTGAACATTATTTAGATGATTCAAATGTCAGAAGAATATTTATTGTCTTTGAGTATGTACCTAATGGATCACTCAAGACTTGGATCACAGATAGACATTATAGAAAGTCTCTTACTTGGACTCAACGCATAGAAGCTGCAATTGGAGTAGCAAAGGGAATCAAATTTTTGCATACAGAGATTGTTCCTTCTGTATATTCAAATAATCTCAAAATTACAGATGTTTTAATGGATCAGAACTTTGTTGCAAAAATCAGTAGTTATAACATGCCTTTGTTATCCAACATTGGAAAGGTTGGTCAAGGAAATATATTCAAAAGTCCTAGCTTTAACAAAAGTGTAAAAAGTGAAGACAAGTTTGATATATATGACTTTGGGGTGATATTGATGGAACTCATTCTAGGAAGGACAATAAAGTCAAGAAATGTGGACACTTTGAAGGATTTGTTACAATCAAGCATAACATCAGATGATGAAGCTAGAAGAAGCATTATAGATTCATCGATTCGTAACGCATGTTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGATGTTTAGTTAAAGAGCCAGAAGAAAGGCCTTCTATAGAAGATGTTTTGTGGAATTTGCAGTTTGCTTCTCAAGTCCAAGATGCATGGAGAGGAGACTCTTTAAGTAGTGATAGCTCACCCATCTCGCCTTTACCGTCTCAACGAATGAACTTCCATTAG 2340 0.3526 MEKKLYPKVLLVLVTIFLSISYTNQLQSTHTRTLLRIKRLLNFPSILSSWNSTTDFCNTDSKASLSVVCYEQTITQLHIVGETKPQQLPKNFSIDSFFTTLLRIPTLKVLTLVSLGLWGPLPSKISGLSSLEIVNMSSNFLYGKIPQELPLLSNLQALILDNNMFEGHLPDWLDSFPSLTVLNLNQNLFNGSLPDSLSSLTNMRVLSLSHNRFYGSVPDLSRLVNLQVLELDDNSFGPNFPRTYNKLVTCVLRNNKFRSSLPDNMSSYYQLERFDISENAFVGPFQLELFSLPAISYINISRNKLSGMLFENLSCNSILEEVDLSSNLLTGRLPKCLVLNSNDRKVLYGGNCLEETNQNQHEQAFCHTEAIAVGIGLNERKKHKGVSKTVLAFGIIGGIFGGISLVALIFMIMIRRRNGKTIMTKNSKTKLISEKAASGKLITDSRHVPKAMKFGTVGLPPYRAFSLEEIVAATNNFDTTSFIGEGSQGQMNRGQLKDGSLVAIRSVKLTKSCRTRDFMQHIEFISKFRHHHLVSVLGHCFEHYLDDSNVRRIFIVFEYVPNGSLKTWITDRHYRKSLTWTQRIEAAIGVAKGIKFLHTEIVPSVYSNNLKITDVLMDQNFVAKISSYNMPLLSNIGKVGQGNIFKSPSFNKSVKSEDKFDIYDFGVILMELILGRTIKSRNVDTLKDLLQSSITSDDEARRSIIDSSIRNACLDQSLKTMMEICVRCLVKEPEERPSIEDVLWNLQFASQVQDAWRGDSLSSDSSPISPLPSQRMNFH* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0440 779 Pfam Protein tyrosine and serine/threonine kinase 481 743 IPR001245 GO:0004672|GO:0006468
Tpr5g0440 779 SUPERFAMILY L domain-like 30 353 - -
Tpr5g0440 779 Gene3D Phosphorylase Kinase; domain 1 442 559 - -
Tpr5g0440 779 Gene3D Transferase(Phosphotransferase) domain 1 560 761 - -
Tpr5g0440 779 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 772 - -
Tpr5g0440 779 SUPERFAMILY Protein kinase-like (PK-like) 458 750 IPR011009 -
Tpr5g0440 779 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Tpr5g0440 779 ProSiteProfiles Protein kinase domain profile. 477 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0440 779 Gene3D Ribonuclease Inhibitor 247 360 IPR032675 -
Tpr5g0440 779 PANTHER OS07G0166700 PROTEIN 7 772 IPR045272 GO:0004714|GO:0006468
Tpr5g0440 779 Gene3D Ribonuclease Inhibitor 27 246 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0440 Tpr-Chr5 6612274 6620037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0440 43 772 Miscellaneous Gene Families AT3G03770 59.569 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tpr5g0440 PK_Tyr_Ser-Thr 7.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0440 - - gmx:100813207 1106.66